Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tnfsf4P43488 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tnfsf4P43488 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tnfsf4P43488 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tnfsf4P43488 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tnfsf4P43488 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tnfsf4P43488 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Tnfsf4P43488 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tnfsf4P43488 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Tnfsf4P43488 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Tnfsf4P43488 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Tnfsf4P43488 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Tnfsf4P43488 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Tnfsf4P43488 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Tnfsf4P43488 Gm14726-201ENSMUST00000120623 896 ntBASIC11.28□□□□□ -0.6
Tnfsf4P43488 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Tnfsf4P43488 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Tnfsf4P43488 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tnfsf4P43488 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC11.28□□□□□ -0.6
Tnfsf4P43488 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC11.28□□□□□ -0.6
Tnfsf4P43488 Gm45691-201ENSMUST00000206905 1120 ntBASIC11.28□□□□□ -0.6
Tnfsf4P43488 Gm45598-202ENSMUST00000210719 986 ntBASIC11.28□□□□□ -0.6
Tnfsf4P43488 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Tnfsf4P43488 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC11.28□□□□□ -0.6
Tnfsf4P43488 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC11.28□□□□□ -0.6
Tnfsf4P43488 AC121960.1-201ENSMUST00000227982 564 ntBASIC11.28□□□□□ -0.6
Tnfsf4P43488 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tnfsf4P43488 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tnfsf4P43488 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tnfsf4P43488 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Tnfsf4P43488 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tnfsf4P43488 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tnfsf4P43488 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tnfsf4P43488 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC11.28□□□□□ -0.6
Tnfsf4P43488 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC11.28□□□□□ -0.6
Tnfsf4P43488 AC154537.1-201ENSMUST00000226101 1304 ntBASIC11.28□□□□□ -0.6
Tnfsf4P43488 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
Tnfsf4P43488 AC126444.1-201ENSMUST00000225938 1768 ntBASIC11.28□□□□□ -0.6
Tnfsf4P43488 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tnfsf4P43488 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tnfsf4P43488 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC11.28□□□□□ -0.6
Tnfsf4P43488 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tnfsf4P43488 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Tnfsf4P43488 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Tnfsf4P43488 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Tnfsf4P43488 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Tnfsf4P43488 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC11.27□□□□□ -0.6
Tnfsf4P43488 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Tnfsf4P43488 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Tnfsf4P43488 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Tnfsf4P43488 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Tnfsf4P43488 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC11.27□□□□□ -0.6
Tnfsf4P43488 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Tnfsf4P43488 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Tnfsf4P43488 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC11.27□□□□□ -0.61
Tnfsf4P43488 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Tnfsf4P43488 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Tnfsf4P43488 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Tnfsf4P43488 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Tnfsf4P43488 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC11.27□□□□□ -0.61
Tnfsf4P43488 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Tnfsf4P43488 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Tnfsf4P43488 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC11.27□□□□□ -0.61
Tnfsf4P43488 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC11.27□□□□□ -0.61
Tnfsf4P43488 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Tnfsf4P43488 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Tnfsf4P43488 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC11.27□□□□□ -0.61
Tnfsf4P43488 Gm27046-201ENSMUST00000182160 463 ntBASIC11.27□□□□□ -0.61
Tnfsf4P43488 Gm27501-201ENSMUST00000183599 107 ntBASIC11.27□□□□□ -0.61
Tnfsf4P43488 Gm6621-201ENSMUST00000193251 772 ntBASIC11.27□□□□□ -0.61
Tnfsf4P43488 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC11.27□□□□□ -0.61
Tnfsf4P43488 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC11.27□□□□□ -0.61
Tnfsf4P43488 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Tnfsf4P43488 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Tnfsf4P43488 Gm18062-201ENSMUST00000208020 547 ntBASIC11.27□□□□□ -0.61
Tnfsf4P43488 Gm18055-201ENSMUST00000208254 547 ntBASIC11.27□□□□□ -0.61
Tnfsf4P43488 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC11.27□□□□□ -0.61
Tnfsf4P43488 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Tnfsf4P43488 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Tnfsf4P43488 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Tnfsf4P43488 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Tnfsf4P43488 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Tnfsf4P43488 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Tnfsf4P43488 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Tnfsf4P43488 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Tnfsf4P43488 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Tnfsf4P43488 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Tnfsf4P43488 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
Tnfsf4P43488 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC11.27□□□□□ -0.61
Tnfsf4P43488 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Tnfsf4P43488 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Tnfsf4P43488 Gm9200-201ENSMUST00000118513 1354 ntBASIC11.27□□□□□ -0.61
Tnfsf4P43488 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
Tnfsf4P43488 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Tnfsf4P43488 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Tnfsf4P43488 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Tnfsf4P43488 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Tnfsf4P43488 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Tnfsf4P43488 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Tnfsf4P43488 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms