Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Mmp13P33435 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Mmp13P33435 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Mmp13P33435 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC11.99□□□□□ -0.49
Mmp13P33435 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Mmp13P33435 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Mmp13P33435 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Mmp13P33435 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Mmp13P33435 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Mmp13P33435 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Mmp13P33435 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Mmp13P33435 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Mmp13P33435 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC11.99□□□□□ -0.49
Mmp13P33435 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Mmp13P33435 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC11.99□□□□□ -0.49
Mmp13P33435 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Mmp13P33435 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Mmp13P33435 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Mmp13P33435 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Mmp13P33435 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Mmp13P33435 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC11.99□□□□□ -0.49
Mmp13P33435 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Mmp13P33435 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC11.98□□□□□ -0.49
Mmp13P33435 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Mmp13P33435 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC11.98□□□□□ -0.49
Mmp13P33435 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Mmp13P33435 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Mmp13P33435 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Mmp13P33435 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Mmp13P33435 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC11.98□□□□□ -0.49
Mmp13P33435 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Mmp13P33435 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Mmp13P33435 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Mmp13P33435 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Mmp13P33435 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Mmp13P33435 Gm12015-201ENSMUST00000117065 843 ntBASIC11.98□□□□□ -0.49
Mmp13P33435 Gm14017-201ENSMUST00000121934 386 ntBASIC11.98□□□□□ -0.49
Mmp13P33435 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Mmp13P33435 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Mmp13P33435 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Mmp13P33435 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Mmp13P33435 Gm9230-201ENSMUST00000188228 532 ntBASIC11.98□□□□□ -0.49
Mmp13P33435 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Mmp13P33435 Gm32999-201ENSMUST00000192693 562 ntBASIC11.98□□□□□ -0.49
Mmp13P33435 Gm44262-201ENSMUST00000204969 372 ntBASIC11.98□□□□□ -0.49
Mmp13P33435 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Mmp13P33435 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC11.98□□□□□ -0.49
Mmp13P33435 Gm45598-202ENSMUST00000210719 986 ntBASIC11.98□□□□□ -0.49
Mmp13P33435 Gm18212-201ENSMUST00000211678 889 ntBASIC11.98□□□□□ -0.49
Mmp13P33435 Aprt-ps-201ENSMUST00000212311 505 ntBASIC11.98□□□□□ -0.49
Mmp13P33435 Gm7293-201ENSMUST00000216682 1007 ntBASIC11.98□□□□□ -0.49
Mmp13P33435 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC11.98□□□□□ -0.49
Mmp13P33435 AC163667.3-201ENSMUST00000225774 222 ntBASIC11.98□□□□□ -0.49
Mmp13P33435 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Mmp13P33435 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Mmp13P33435 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Mmp13P33435 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC11.98□□□□□ -0.49
Mmp13P33435 Gm21136-201ENSMUST00000186812 2575 ntBASIC11.98□□□□□ -0.49
Mmp13P33435 Gm6605-201ENSMUST00000031488 2574 ntBASIC11.98□□□□□ -0.49
Mmp13P33435 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Mmp13P33435 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Mmp13P33435 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC11.98□□□□□ -0.49
Mmp13P33435 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Mmp13P33435 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Mmp13P33435 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Mmp13P33435 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC11.98□□□□□ -0.49
Mmp13P33435 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Mmp13P33435 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Mmp13P33435 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Mmp13P33435 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Mmp13P33435 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Mmp13P33435 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Mmp13P33435 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Mmp13P33435 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Mmp13P33435 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Mmp13P33435 Gm21939-201ENSMUST00000221137 2773 ntBASIC11.97□□□□□ -0.49
Mmp13P33435 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Mmp13P33435 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
Mmp13P33435 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
Mmp13P33435 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Mmp13P33435 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC11.97□□□□□ -0.49
Mmp13P33435 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Mmp13P33435 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Mmp13P33435 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Mmp13P33435 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Mmp13P33435 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Mmp13P33435 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Mmp13P33435 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC11.97□□□□□ -0.49
Mmp13P33435 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC11.97□□□□□ -0.49
Mmp13P33435 Gm11700-201ENSMUST00000119409 403 ntBASIC11.97□□□□□ -0.49
Mmp13P33435 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC11.97□□□□□ -0.49
Mmp13P33435 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Mmp13P33435 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC11.97□□□□□ -0.49
Mmp13P33435 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Mmp13P33435 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC11.97□□□□□ -0.49
Mmp13P33435 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
Mmp13P33435 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Mmp13P33435 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Mmp13P33435 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Mmp13P33435 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms