Protein–RNA interactions for Protein: P20615

Hoxb9, Homeobox protein Hox-B9, mousemouse

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb9P20615 AC159308.2-201ENSMUST00000213592 2325 ntBASIC11.19□□□□□ -0.62
Hoxb9P20615 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Hoxb9P20615 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Hoxb9P20615 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Hoxb9P20615 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Hoxb9P20615 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Hoxb9P20615 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Hoxb9P20615 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Hoxb9P20615 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Hoxb9P20615 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC11.19□□□□□ -0.62
Hoxb9P20615 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Hoxb9P20615 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC11.19□□□□□ -0.62
Hoxb9P20615 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Hoxb9P20615 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Hoxb9P20615 Gm8459-201ENSMUST00000162504 760 ntBASIC11.19□□□□□ -0.62
Hoxb9P20615 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC11.19□□□□□ -0.62
Hoxb9P20615 Gm20495-201ENSMUST00000173902 235 ntBASIC11.19□□□□□ -0.62
Hoxb9P20615 Gm4482-201ENSMUST00000200876 742 ntBASIC11.19□□□□□ -0.62
Hoxb9P20615 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC11.19□□□□□ -0.62
Hoxb9P20615 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC11.19□□□□□ -0.62
Hoxb9P20615 Gm9176-201ENSMUST00000219955 1120 ntBASIC11.19□□□□□ -0.62
Hoxb9P20615 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Hoxb9P20615 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Hoxb9P20615 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC11.19□□□□□ -0.62
Hoxb9P20615 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
Hoxb9P20615 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Hoxb9P20615 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Hoxb9P20615 Gm9129-201ENSMUST00000218173 1689 ntBASIC11.19□□□□□ -0.62
Hoxb9P20615 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Hoxb9P20615 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
Hoxb9P20615 Gm37122-201ENSMUST00000195313 1567 ntBASIC11.19□□□□□ -0.62
Hoxb9P20615 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Hoxb9P20615 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC11.19□□□□□ -0.62
Hoxb9P20615 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Hoxb9P20615 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC11.19□□□□□ -0.62
Hoxb9P20615 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Hoxb9P20615 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Hoxb9P20615 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC11.18□□□□□ -0.62
Hoxb9P20615 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Hoxb9P20615 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hoxb9P20615 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Hoxb9P20615 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hoxb9P20615 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Hoxb9P20615 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC11.18□□□□□ -0.62
Hoxb9P20615 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hoxb9P20615 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC11.18□□□□□ -0.62
Hoxb9P20615 AC122811.1-201ENSMUST00000222257 2921 ntBASIC11.18□□□□□ -0.62
Hoxb9P20615 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hoxb9P20615 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hoxb9P20615 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Hoxb9P20615 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC11.18□□□□□ -0.62
Hoxb9P20615 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Hoxb9P20615 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC11.18□□□□□ -0.62
Hoxb9P20615 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC11.18□□□□□ -0.62
Hoxb9P20615 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC11.18□□□□□ -0.62
Hoxb9P20615 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hoxb9P20615 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC11.18□□□□□ -0.62
Hoxb9P20615 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Hoxb9P20615 Gm24990-201ENSMUST00000157406 323 ntBASIC11.18□□□□□ -0.62
Hoxb9P20615 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Hoxb9P20615 Gm10807-201ENSMUST00000177134 795 ntBASIC11.18□□□□□ -0.62
Hoxb9P20615 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC11.18□□□□□ -0.62
Hoxb9P20615 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Hoxb9P20615 Gm5733-201ENSMUST00000190232 939 ntBASIC11.18□□□□□ -0.62
Hoxb9P20615 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC11.18□□□□□ -0.62
Hoxb9P20615 Gm5369-201ENSMUST00000217499 588 ntBASIC11.18□□□□□ -0.62
Hoxb9P20615 CT025694.1-201ENSMUST00000226188 934 ntBASIC11.18□□□□□ -0.62
Hoxb9P20615 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hoxb9P20615 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hoxb9P20615 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hoxb9P20615 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Hoxb9P20615 Gm21811-201ENSMUST00000096485 930 ntBASIC11.18□□□□□ -0.62
Hoxb9P20615 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hoxb9P20615 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
Hoxb9P20615 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
Hoxb9P20615 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Hoxb9P20615 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hoxb9P20615 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hoxb9P20615 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hoxb9P20615 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hoxb9P20615 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hoxb9P20615 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hoxb9P20615 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Hoxb9P20615 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hoxb9P20615 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Hoxb9P20615 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hoxb9P20615 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hoxb9P20615 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
Hoxb9P20615 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hoxb9P20615 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hoxb9P20615 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hoxb9P20615 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hoxb9P20615 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC11.17□□□□□ -0.62
Hoxb9P20615 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hoxb9P20615 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hoxb9P20615 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Hoxb9P20615 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Hoxb9P20615 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Hoxb9P20615 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Hoxb9P20615 CT573086.2-201ENSMUST00000227277 4992 ntBASIC11.17□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms