Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smarce1O54941 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smarce1O54941 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Smarce1O54941 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Smarce1O54941 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Smarce1O54941 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smarce1O54941 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smarce1O54941 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC13.89□□□□□ -0.19
Smarce1O54941 Armcx4-201ENSMUST00000124226 7996 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
Smarce1O54941 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smarce1O54941 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC13.89□□□□□ -0.19
Smarce1O54941 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Smarce1O54941 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Smarce1O54941 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC13.88□□□□□ -0.19
Smarce1O54941 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC13.88□□□□□ -0.19
Smarce1O54941 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Smarce1O54941 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Smarce1O54941 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Smarce1O54941 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Smarce1O54941 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Smarce1O54941 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Smarce1O54941 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Smarce1O54941 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Smarce1O54941 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Smarce1O54941 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Smarce1O54941 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC13.88□□□□□ -0.19
Smarce1O54941 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC13.88□□□□□ -0.19
Smarce1O54941 Gm12957-201ENSMUST00000117835 377 ntBASIC13.88□□□□□ -0.19
Smarce1O54941 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Smarce1O54941 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Smarce1O54941 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC13.88□□□□□ -0.19
Smarce1O54941 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC13.88□□□□□ -0.19
Smarce1O54941 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Smarce1O54941 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Smarce1O54941 AY702102-202ENSMUST00000194651 1173 ntBASIC13.88□□□□□ -0.19
Smarce1O54941 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC13.88□□□□□ -0.19
Smarce1O54941 Rprl1-202ENSMUST00000198476 238 ntBASIC13.88□□□□□ -0.19
Smarce1O54941 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Smarce1O54941 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC13.88□□□□□ -0.19
Smarce1O54941 Olfr1347-205ENSMUST00000220413 964 ntBASIC13.88□□□□□ -0.19
Smarce1O54941 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Smarce1O54941 AC161537.1-201ENSMUST00000226199 1015 ntBASIC13.88□□□□□ -0.19
Smarce1O54941 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Smarce1O54941 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Smarce1O54941 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Smarce1O54941 Gm5705-201ENSMUST00000066241 711 ntBASIC13.88□□□□□ -0.19
Smarce1O54941 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Smarce1O54941 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Smarce1O54941 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Smarce1O54941 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Smarce1O54941 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Smarce1O54941 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC13.88□□□□□ -0.19
Smarce1O54941 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Smarce1O54941 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Smarce1O54941 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC13.88□□□□□ -0.19
Smarce1O54941 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Smarce1O54941 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC13.88□□□□□ -0.19
Smarce1O54941 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Smarce1O54941 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC13.88□□□□□ -0.19
Smarce1O54941 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Smarce1O54941 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Smarce1O54941 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Smarce1O54941 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
Smarce1O54941 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Smarce1O54941 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Smarce1O54941 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Smarce1O54941 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Smarce1O54941 AC123619.2-202ENSMUST00000225097 1568 ntBASIC13.88□□□□□ -0.19
Smarce1O54941 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Smarce1O54941 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Smarce1O54941 Gm45496-201ENSMUST00000209918 2917 ntBASIC13.87□□□□□ -0.19
Smarce1O54941 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Smarce1O54941 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Smarce1O54941 AC131068.2-201ENSMUST00000226175 1453 ntBASIC13.87□□□□□ -0.19
Smarce1O54941 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Smarce1O54941 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Smarce1O54941 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Smarce1O54941 Med13l-201ENSMUST00000100816 9296 ntAPPRIS P3 TSL 2 BASIC13.87□□□□□ -0.19
Smarce1O54941 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Smarce1O54941 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Smarce1O54941 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Smarce1O54941 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Smarce1O54941 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Smarce1O54941 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Smarce1O54941 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Smarce1O54941 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC13.87□□□□□ -0.19
Smarce1O54941 Gm12742-201ENSMUST00000117326 410 ntBASIC13.87□□□□□ -0.19
Smarce1O54941 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Smarce1O54941 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC13.87□□□□□ -0.19
Smarce1O54941 Rps4l-202ENSMUST00000204242 789 ntBASIC13.87□□□□□ -0.19
Smarce1O54941 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Smarce1O54941 Gm9368-201ENSMUST00000219348 831 ntBASIC13.87□□□□□ -0.19
Smarce1O54941 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Smarce1O54941 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Smarce1O54941 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Smarce1O54941 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
Smarce1O54941 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Smarce1O54941 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Smarce1O54941 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Smarce1O54941 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms