Protein–RNA interactions for Protein: O54890

Itgb3, Integrin beta-3, mousemouse

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Itgb3O54890 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Itgb3O54890 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Itgb3O54890 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Itgb3O54890 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Itgb3O54890 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Itgb3O54890 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC12.42□□□□□ -0.42
Itgb3O54890 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Itgb3O54890 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Itgb3O54890 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Itgb3O54890 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Itgb3O54890 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Itgb3O54890 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Itgb3O54890 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Itgb3O54890 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Itgb3O54890 Gm9387-201ENSMUST00000098624 1320 ntBASIC12.41□□□□□ -0.42
Itgb3O54890 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Itgb3O54890 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Itgb3O54890 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Itgb3O54890 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Itgb3O54890 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Itgb3O54890 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Itgb3O54890 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC12.41□□□□□ -0.42
Itgb3O54890 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Itgb3O54890 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Itgb3O54890 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Itgb3O54890 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Itgb3O54890 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Itgb3O54890 Gm15881-201ENSMUST00000148792 942 ntBASIC12.41□□□□□ -0.42
Itgb3O54890 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Itgb3O54890 Gm6548-201ENSMUST00000167498 1165 ntBASIC12.41□□□□□ -0.42
Itgb3O54890 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC12.41□□□□□ -0.42
Itgb3O54890 Gm44270-201ENSMUST00000203084 1234 ntBASIC12.41□□□□□ -0.42
Itgb3O54890 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC12.41□□□□□ -0.42
Itgb3O54890 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Itgb3O54890 Gm17831-201ENSMUST00000205579 900 ntBASIC12.41□□□□□ -0.42
Itgb3O54890 Gm44506-201ENSMUST00000206278 965 ntBASIC12.41□□□□□ -0.42
Itgb3O54890 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Itgb3O54890 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Itgb3O54890 CT009489.1-201ENSMUST00000227740 1893 ntBASIC12.41□□□□□ -0.42
Itgb3O54890 Zfp125-201ENSMUST00000079237 2488 ntBASIC12.41□□□□□ -0.42
Itgb3O54890 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC12.41□□□□□ -0.42
Itgb3O54890 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Itgb3O54890 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC12.41□□□□□ -0.42
Itgb3O54890 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Itgb3O54890 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Itgb3O54890 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Itgb3O54890 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
Itgb3O54890 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.42
Itgb3O54890 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Itgb3O54890 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Itgb3O54890 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Itgb3O54890 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Itgb3O54890 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC12.4□□□□□ -0.42
Itgb3O54890 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Itgb3O54890 Gm38194-201ENSMUST00000194529 2211 ntBASIC12.4□□□□□ -0.42
Itgb3O54890 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Itgb3O54890 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Itgb3O54890 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Itgb3O54890 Gm22711-201ENSMUST00000116890 133 ntBASIC12.4□□□□□ -0.42
Itgb3O54890 Gm13328-201ENSMUST00000120816 1020 ntBASIC12.4□□□□□ -0.42
Itgb3O54890 Gm7150-201ENSMUST00000122032 981 ntBASIC12.4□□□□□ -0.42
Itgb3O54890 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Itgb3O54890 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC12.4□□□□□ -0.42
Itgb3O54890 Gm18367-201ENSMUST00000176139 600 ntBASIC12.4□□□□□ -0.42
Itgb3O54890 Gm19459-201ENSMUST00000176240 835 ntBASIC12.4□□□□□ -0.42
Itgb3O54890 Gm38314-201ENSMUST00000195709 625 ntBASIC12.4□□□□□ -0.42
Itgb3O54890 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Itgb3O54890 Gm9132-201ENSMUST00000210182 832 ntBASIC12.4□□□□□ -0.42
Itgb3O54890 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC12.4□□□□□ -0.42
Itgb3O54890 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Itgb3O54890 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Itgb3O54890 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Itgb3O54890 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Itgb3O54890 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Itgb3O54890 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Itgb3O54890 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Itgb3O54890 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Itgb3O54890 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Itgb3O54890 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.43
Itgb3O54890 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Itgb3O54890 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Itgb3O54890 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Itgb3O54890 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Itgb3O54890 Gm18198-201ENSMUST00000204986 1551 ntBASIC12.39□□□□□ -0.43
Itgb3O54890 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Itgb3O54890 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Itgb3O54890 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Itgb3O54890 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Itgb3O54890 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Itgb3O54890 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Itgb3O54890 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Itgb3O54890 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Itgb3O54890 Gm43242-201ENSMUST00000199507 1776 ntBASIC12.39□□□□□ -0.43
Itgb3O54890 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Itgb3O54890 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Itgb3O54890 Gm15725-201ENSMUST00000119947 1090 ntBASIC12.39□□□□□ -0.43
Itgb3O54890 Gm11836-201ENSMUST00000121022 441 ntBASIC12.39□□□□□ -0.43
Itgb3O54890 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Itgb3O54890 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC12.39□□□□□ -0.43
Itgb3O54890 Gm10807-201ENSMUST00000177134 795 ntBASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 69.7 ms