Protein–RNA interactions for Protein: O35134

Polr1a, DNA-directed RNA polymerase I subunit RPA1, mousemouse

Known RBP Predictions only

Length 1,717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr1aO35134 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Polr1aO35134 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Polr1aO35134 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Polr1aO35134 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Polr1aO35134 AC154517.2-201ENSMUST00000220829 2458 ntBASIC17.71■□□□□ 0.42
Polr1aO35134 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Polr1aO35134 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Polr1aO35134 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Polr1aO35134 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Polr1aO35134 Gm1826-201ENSMUST00000118646 1162 ntBASIC17.7■□□□□ 0.42
Polr1aO35134 Gm43564-201ENSMUST00000196185 211 ntBASIC17.7■□□□□ 0.42
Polr1aO35134 Apoa5-205ENSMUST00000215187 495 ntTSL 5 BASIC17.7■□□□□ 0.42
Polr1aO35134 Gm17749-201ENSMUST00000216282 690 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Polr1aO35134 Tex30-201ENSMUST00000027215 1272 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Polr1aO35134 Krtap12-1-201ENSMUST00000092370 656 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Polr1aO35134 Gm7104-201ENSMUST00000179741 2532 ntBASIC17.7■□□□□ 0.42
Polr1aO35134 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Polr1aO35134 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Polr1aO35134 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Polr1aO35134 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC17.7■□□□□ 0.42
Polr1aO35134 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Polr1aO35134 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Polr1aO35134 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
Polr1aO35134 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Polr1aO35134 Gm13583-202ENSMUST00000151931 1476 ntTSL 2 BASIC17.7■□□□□ 0.42
Polr1aO35134 Gm44573-201ENSMUST00000191753 2370 ntBASIC17.7■□□□□ 0.42
Polr1aO35134 Nr1i3-201ENSMUST00000005820 1414 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Polr1aO35134 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Polr1aO35134 Ube2d-ps-201ENSMUST00000121354 441 ntBASIC17.69■□□□□ 0.42
Polr1aO35134 Mocs2-201ENSMUST00000015680 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Polr1aO35134 Fxyd5-203ENSMUST00000159924 805 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
Polr1aO35134 Fxyd5-210ENSMUST00000162116 817 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
Polr1aO35134 Gm35960-201ENSMUST00000202712 767 ntBASIC17.69■□□□□ 0.42
Polr1aO35134 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC17.69■□□□□ 0.42
Polr1aO35134 Olfr889-201ENSMUST00000072290 945 ntTSL 5 BASIC17.69■□□□□ 0.42
Polr1aO35134 Taar7a-201ENSMUST00000078532 1077 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Polr1aO35134 Taar7b-201ENSMUST00000092658 1077 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Polr1aO35134 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Polr1aO35134 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Polr1aO35134 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC17.69■□□□□ 0.42
Polr1aO35134 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Polr1aO35134 Ksr1-207ENSMUST00000226282 5260 ntBASIC17.69■□□□□ 0.42
Polr1aO35134 Olfr171-202ENSMUST00000205467 1406 ntAPPRIS ALT1 TSL 2 BASIC17.69■□□□□ 0.42
Polr1aO35134 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Polr1aO35134 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Polr1aO35134 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Polr1aO35134 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Polr1aO35134 Gm3836-201ENSMUST00000211377 1613 ntBASIC17.69■□□□□ 0.42
Polr1aO35134 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Polr1aO35134 Camk2a-205ENSMUST00000115297 499 ntTSL 2 BASIC17.69■□□□□ 0.42
Polr1aO35134 9530085P06Rik-201ENSMUST00000182121 827 ntBASIC17.69■□□□□ 0.42
Polr1aO35134 4930557B06Rik-201ENSMUST00000200193 381 ntBASIC17.69■□□□□ 0.42
Polr1aO35134 Gm44507-201ENSMUST00000206249 343 ntTSL 5 BASIC17.69■□□□□ 0.42
Polr1aO35134 Cox6b1-204ENSMUST00000208838 354 ntTSL 3 BASIC17.69■□□□□ 0.42
Polr1aO35134 Bloc1s1-201ENSMUST00000026405 550 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Polr1aO35134 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Polr1aO35134 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Polr1aO35134 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Polr1aO35134 Gm3642-201ENSMUST00000166895 1762 ntAPPRIS P5 TSL 5 BASIC17.69■□□□□ 0.42
Polr1aO35134 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Polr1aO35134 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Polr1aO35134 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Polr1aO35134 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Polr1aO35134 Btrc-209ENSMUST00000224478 2194 ntBASIC17.68■□□□□ 0.42
Polr1aO35134 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Polr1aO35134 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC17.68■□□□□ 0.42
Polr1aO35134 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Polr1aO35134 Gm14005-209ENSMUST00000224993 1832 ntBASIC17.68■□□□□ 0.42
Polr1aO35134 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Polr1aO35134 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Polr1aO35134 Gm12418-201ENSMUST00000118116 942 ntBASIC17.68■□□□□ 0.42
Polr1aO35134 Gm15136-201ENSMUST00000120552 533 ntBASIC17.68■□□□□ 0.42
Polr1aO35134 AC034099.1-202ENSMUST00000133843 833 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Polr1aO35134 Cdhr4-208ENSMUST00000176373 492 ntTSL 5 BASIC17.68■□□□□ 0.42
Polr1aO35134 Olfr1358-201ENSMUST00000204477 1064 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Polr1aO35134 Calca-207ENSMUST00000206853 720 ntTSL 2 BASIC17.68■□□□□ 0.42
Polr1aO35134 AC165249.1-202ENSMUST00000217990 734 ntTSL 3 BASIC17.68■□□□□ 0.42
Polr1aO35134 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Polr1aO35134 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Polr1aO35134 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Polr1aO35134 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Polr1aO35134 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC17.68■□□□□ 0.42
Polr1aO35134 5330413D20Rik-201ENSMUST00000208649 1416 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Polr1aO35134 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
Polr1aO35134 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Polr1aO35134 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
Polr1aO35134 Cenpn-203ENSMUST00000212263 1616 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Polr1aO35134 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC17.68■□□□□ 0.42
Polr1aO35134 Zfp869-201ENSMUST00000080987 1590 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Polr1aO35134 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Polr1aO35134 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Polr1aO35134 Gm22344-201ENSMUST00000122642 278 ntBASIC17.67■□□□□ 0.42
Polr1aO35134 Saxo2-202ENSMUST00000126478 430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Polr1aO35134 Ndufb5-204ENSMUST00000127477 1079 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Polr1aO35134 Znrd1-202ENSMUST00000172518 710 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Polr1aO35134 Gm26119-201ENSMUST00000175601 104 ntBASIC17.67■□□□□ 0.42
Polr1aO35134 Dusp3-207ENSMUST00000176261 496 ntTSL 3 BASIC17.67■□□□□ 0.42
Polr1aO35134 4930578M01Rik-201ENSMUST00000180490 907 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Polr1aO35134 Gm18014-201ENSMUST00000183369 817 ntBASIC17.67■□□□□ 0.42
Polr1aO35134 Cdk5-203ENSMUST00000198990 783 ntTSL 5 BASIC17.67■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 73.3 ms