Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 E230014E18Rik-201ENSMUST00000215920 859 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Ccdc180J3QNE4 Eif4ebp3-201ENSMUST00000036765 744 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ccdc180J3QNE4 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ccdc180J3QNE4 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC21.05■□□□□ 0.96
Ccdc180J3QNE4 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ccdc180J3QNE4 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ccdc180J3QNE4 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Ccdc180J3QNE4 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ccdc180J3QNE4 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ccdc180J3QNE4 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ccdc180J3QNE4 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ccdc180J3QNE4 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Ccdc180J3QNE4 Gm12943-201ENSMUST00000119616 210 ntBASIC21.05■□□□□ 0.96
Ccdc180J3QNE4 Pfdn5-203ENSMUST00000165671 830 ntTSL 2 BASIC21.05■□□□□ 0.96
Ccdc180J3QNE4 Gm8451-201ENSMUST00000170338 447 ntBASIC21.05■□□□□ 0.96
Ccdc180J3QNE4 Gm24328-201ENSMUST00000175104 67 ntBASIC21.05■□□□□ 0.96
Ccdc180J3QNE4 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC21.05■□□□□ 0.96
Ccdc180J3QNE4 Gm5267-201ENSMUST00000191574 1045 ntBASIC21.05■□□□□ 0.96
Ccdc180J3QNE4 Gm44814-201ENSMUST00000207018 434 ntBASIC21.05■□□□□ 0.96
Ccdc180J3QNE4 Gm45388-201ENSMUST00000209922 1132 ntTSL 5 BASIC21.05■□□□□ 0.96
Ccdc180J3QNE4 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Ccdc180J3QNE4 9430078K24Rik-203ENSMUST00000220293 638 ntTSL 3 BASIC21.05■□□□□ 0.96
Ccdc180J3QNE4 Taar7f-201ENSMUST00000071691 1077 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Ccdc180J3QNE4 Gm7536-201ENSMUST00000077389 444 ntBASIC21.05■□□□□ 0.96
Ccdc180J3QNE4 Gm5453-201ENSMUST00000080866 447 ntBASIC21.05■□□□□ 0.96
Ccdc180J3QNE4 Taar7d-201ENSMUST00000092657 1077 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Ccdc180J3QNE4 Gm18986-201ENSMUST00000216029 1986 ntBASIC21.05■□□□□ 0.96
Ccdc180J3QNE4 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ccdc180J3QNE4 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Ccdc180J3QNE4 Gm14005-210ENSMUST00000225087 1413 ntBASIC21.05■□□□□ 0.96
Ccdc180J3QNE4 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Ccdc180J3QNE4 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ccdc180J3QNE4 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ccdc180J3QNE4 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Ccdc180J3QNE4 Ppp1r32-201ENSMUST00000038842 1458 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ccdc180J3QNE4 Ccdc90b-202ENSMUST00000085017 1494 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Ccdc180J3QNE4 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC21.04■□□□□ 0.96
Ccdc180J3QNE4 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ccdc180J3QNE4 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ccdc180J3QNE4 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ccdc180J3QNE4 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ccdc180J3QNE4 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ccdc180J3QNE4 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ccdc180J3QNE4 Pck2-205ENSMUST00000226352 2784 ntBASIC21.04■□□□□ 0.96
Ccdc180J3QNE4 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ccdc180J3QNE4 Ankrd7-202ENSMUST00000115396 1157 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Ccdc180J3QNE4 Gm15329-201ENSMUST00000121408 155 ntBASIC21.04■□□□□ 0.96
Ccdc180J3QNE4 Zfp637-210ENSMUST00000164472 1098 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ccdc180J3QNE4 Mir7035-201ENSMUST00000184713 82 ntBASIC21.04■□□□□ 0.96
Ccdc180J3QNE4 C230057A21Rik-202ENSMUST00000195781 600 ntTSL 3 BASIC21.04■□□□□ 0.96
Ccdc180J3QNE4 AC122860.1-201ENSMUST00000217669 773 ntTSL 3 BASIC21.04■□□□□ 0.96
Ccdc180J3QNE4 Gm46224-201ENSMUST00000220221 1242 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Ccdc180J3QNE4 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Ccdc180J3QNE4 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Ccdc180J3QNE4 Gpcpd1-202ENSMUST00000060955 3686 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ccdc180J3QNE4 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
Ccdc180J3QNE4 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ccdc180J3QNE4 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ccdc180J3QNE4 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Ccdc180J3QNE4 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Ccdc180J3QNE4 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ccdc180J3QNE4 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Ccdc180J3QNE4 Alox5-207ENSMUST00000170186 1929 ntTSL 5 BASIC21.03■□□□□ 0.96
Ccdc180J3QNE4 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ccdc180J3QNE4 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Ccdc180J3QNE4 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Ccdc180J3QNE4 Fmr1nb-203ENSMUST00000114647 679 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ccdc180J3QNE4 Gm4982-201ENSMUST00000160440 1098 ntBASIC21.03■□□□□ 0.96
Ccdc180J3QNE4 Gm43969-201ENSMUST00000204833 535 ntBASIC21.03■□□□□ 0.96
Ccdc180J3QNE4 Olfr335-ps-201ENSMUST00000223545 939 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Ccdc180J3QNE4 Tdpoz3-201ENSMUST00000081780 1098 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Ccdc180J3QNE4 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Ccdc180J3QNE4 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ccdc180J3QNE4 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ccdc180J3QNE4 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ccdc180J3QNE4 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ccdc180J3QNE4 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ccdc180J3QNE4 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ccdc180J3QNE4 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ccdc180J3QNE4 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ccdc180J3QNE4 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ccdc180J3QNE4 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ccdc180J3QNE4 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ccdc180J3QNE4 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Ccdc180J3QNE4 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ccdc180J3QNE4 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ccdc180J3QNE4 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Ccdc180J3QNE4 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Ccdc180J3QNE4 Ntm-201ENSMUST00000075069 3022 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Ccdc180J3QNE4 Gm13039-201ENSMUST00000118638 794 ntBASIC21.02■□□□□ 0.96
Ccdc180J3QNE4 Gm13422-201ENSMUST00000118834 504 ntBASIC21.02■□□□□ 0.96
Ccdc180J3QNE4 Nudt12os-201ENSMUST00000145848 939 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Ccdc180J3QNE4 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ccdc180J3QNE4 Adora3-202ENSMUST00000164730 1219 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Ccdc180J3QNE4 B230110C06Rik-201ENSMUST00000181388 1274 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Ccdc180J3QNE4 Gm18801-201ENSMUST00000186616 536 ntBASIC21.02■□□□□ 0.96
Ccdc180J3QNE4 Gm29763-201ENSMUST00000205306 616 ntBASIC21.02■□□□□ 0.96
Ccdc180J3QNE4 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC21.02■□□□□ 0.96
Ccdc180J3QNE4 Cox17-201ENSMUST00000050273 444 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ccdc180J3QNE4 Gm8181-201ENSMUST00000062242 669 ntBASIC21.02■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms