Protein–RNA interactions for Protein: G3X9Z4

Pcf11, Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

Predictions only

Length 1,553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11G3X9Z4 Gm25580-201ENSMUST00000083409 327 ntBASIC17.45■□□□□ 0.38
Pcf11G3X9Z4 Platr19-201ENSMUST00000171380 1466 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Pcf11G3X9Z4 Adgrv1-214ENSMUST00000224088 1492 ntBASIC17.45■□□□□ 0.38
Pcf11G3X9Z4 Oprm1-208ENSMUST00000092734 1569 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcf11G3X9Z4 Cyp2a22-201ENSMUST00000170227 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcf11G3X9Z4 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcf11G3X9Z4 Ksr1-207ENSMUST00000226282 5260 ntBASIC17.44■□□□□ 0.38
Pcf11G3X9Z4 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Pcf11G3X9Z4 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcf11G3X9Z4 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcf11G3X9Z4 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcf11G3X9Z4 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcf11G3X9Z4 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Pcf11G3X9Z4 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcf11G3X9Z4 Tmem39a-204ENSMUST00000163884 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcf11G3X9Z4 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcf11G3X9Z4 E330011O21Rik-202ENSMUST00000209498 1403 ntTSL 5 BASIC17.44■□□□□ 0.38
Pcf11G3X9Z4 Nr1i3-201ENSMUST00000005820 1414 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcf11G3X9Z4 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcf11G3X9Z4 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcf11G3X9Z4 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC17.44■□□□□ 0.38
Pcf11G3X9Z4 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Pcf11G3X9Z4 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Pcf11G3X9Z4 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcf11G3X9Z4 Gng12-205ENSMUST00000114226 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcf11G3X9Z4 Ankrd7-202ENSMUST00000115396 1157 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Pcf11G3X9Z4 Gm13019-201ENSMUST00000120000 276 ntBASIC17.44■□□□□ 0.38
Pcf11G3X9Z4 Gm15911-201ENSMUST00000138992 809 ntTSL 3 BASIC17.44■□□□□ 0.38
Pcf11G3X9Z4 Nmbr-206ENSMUST00000190114 662 ntTSL 3 BASIC17.44■□□□□ 0.38
Pcf11G3X9Z4 Gm31274-201ENSMUST00000197356 229 ntBASIC17.44■□□□□ 0.38
Pcf11G3X9Z4 Gm15469-201ENSMUST00000201750 961 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Pcf11G3X9Z4 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC17.44■□□□□ 0.38
Pcf11G3X9Z4 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
Pcf11G3X9Z4 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
Pcf11G3X9Z4 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcf11G3X9Z4 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
Pcf11G3X9Z4 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcf11G3X9Z4 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Pcf11G3X9Z4 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcf11G3X9Z4 Prdm9-205ENSMUST00000147532 1447 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Pcf11G3X9Z4 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcf11G3X9Z4 Eid3-201ENSMUST00000211623 1305 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Pcf11G3X9Z4 Dcaf12-201ENSMUST00000030145 3442 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcf11G3X9Z4 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcf11G3X9Z4 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Pcf11G3X9Z4 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcf11G3X9Z4 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcf11G3X9Z4 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Pcf11G3X9Z4 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcf11G3X9Z4 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Pcf11G3X9Z4 Rfc4-202ENSMUST00000115337 416 ntTSL 5 BASIC17.43■□□□□ 0.38
Pcf11G3X9Z4 Syngr4-202ENSMUST00000120299 722 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Pcf11G3X9Z4 Mup-ps29-201ENSMUST00000122281 202 ntBASIC17.43■□□□□ 0.38
Pcf11G3X9Z4 Gm25545-201ENSMUST00000122673 323 ntBASIC17.43■□□□□ 0.38
Pcf11G3X9Z4 Utp23-202ENSMUST00000136129 779 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Pcf11G3X9Z4 2210406O10Rik-203ENSMUST00000149687 1198 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Pcf11G3X9Z4 Cldnd2-202ENSMUST00000206839 583 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Pcf11G3X9Z4 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Pcf11G3X9Z4 Gm18204-201ENSMUST00000209835 793 ntBASIC17.43■□□□□ 0.38
Pcf11G3X9Z4 Gm2696-202ENSMUST00000220393 684 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Pcf11G3X9Z4 AC140375.1-201ENSMUST00000225421 694 ntBASIC17.43■□□□□ 0.38
Pcf11G3X9Z4 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcf11G3X9Z4 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcf11G3X9Z4 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC17.43■□□□□ 0.38
Pcf11G3X9Z4 Slc40a1-201ENSMUST00000027137 3370 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcf11G3X9Z4 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcf11G3X9Z4 Brcc3-203ENSMUST00000118428 2093 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Pcf11G3X9Z4 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcf11G3X9Z4 Zfp286-202ENSMUST00000108705 1979 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Pcf11G3X9Z4 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcf11G3X9Z4 AC174797.1-201ENSMUST00000224339 1649 ntBASIC17.42■□□□□ 0.38
Pcf11G3X9Z4 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC17.42■□□□□ 0.38
Pcf11G3X9Z4 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcf11G3X9Z4 Rffl-205ENSMUST00000103218 1264 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Pcf11G3X9Z4 Nudt12os-201ENSMUST00000145848 939 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Pcf11G3X9Z4 Gm16547-201ENSMUST00000159474 293 ntBASIC17.42■□□□□ 0.38
Pcf11G3X9Z4 Fxyd5-209ENSMUST00000162087 762 ntAPPRIS P3 TSL 3 BASIC17.42■□□□□ 0.38
Pcf11G3X9Z4 Gm9639-201ENSMUST00000172205 678 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Pcf11G3X9Z4 Gm19927-201ENSMUST00000185792 781 ntBASIC17.42■□□□□ 0.38
Pcf11G3X9Z4 Gm29083-201ENSMUST00000189205 733 ntTSL 3 BASIC17.42■□□□□ 0.38
Pcf11G3X9Z4 Gm42433-201ENSMUST00000196806 940 ntBASIC17.42■□□□□ 0.38
Pcf11G3X9Z4 Gm42867-201ENSMUST00000202995 469 ntBASIC17.42■□□□□ 0.38
Pcf11G3X9Z4 Gm44647-201ENSMUST00000207402 428 ntBASIC17.42■□□□□ 0.38
Pcf11G3X9Z4 4930543N07Rik-202ENSMUST00000209503 1117 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Pcf11G3X9Z4 Gm40879-201ENSMUST00000220759 612 ntBASIC17.42■□□□□ 0.38
Pcf11G3X9Z4 Arhgef33-207ENSMUST00000224966 490 ntBASIC17.42■□□□□ 0.38
Pcf11G3X9Z4 Olfr889-201ENSMUST00000072290 945 ntTSL 5 BASIC17.42■□□□□ 0.38
Pcf11G3X9Z4 Gm6040-201ENSMUST00000095430 857 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcf11G3X9Z4 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcf11G3X9Z4 Acnat2-202ENSMUST00000107698 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcf11G3X9Z4 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcf11G3X9Z4 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcf11G3X9Z4 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Pcf11G3X9Z4 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcf11G3X9Z4 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcf11G3X9Z4 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC17.42■□□□□ 0.38
Pcf11G3X9Z4 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcf11G3X9Z4 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcf11G3X9Z4 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Pcf11G3X9Z4 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 78.1 ms