Protein–RNA interactions for Protein: G3X8Z7

Chrna9, Cholinergic receptor, nicotinic, alpha polypeptide 9, mousemouse

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna9G3X8Z7 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC12.54□□□□□ -0.4
Chrna9G3X8Z7 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Chrna9G3X8Z7 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Chrna9G3X8Z7 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Chrna9G3X8Z7 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Chrna9G3X8Z7 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Chrna9G3X8Z7 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Chrna9G3X8Z7 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Chrna9G3X8Z7 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Chrna9G3X8Z7 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC12.54□□□□□ -0.4
Chrna9G3X8Z7 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Chrna9G3X8Z7 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Chrna9G3X8Z7 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Chrna9G3X8Z7 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Chrna9G3X8Z7 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Chrna9G3X8Z7 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Chrna9G3X8Z7 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
Chrna9G3X8Z7 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Chrna9G3X8Z7 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Chrna9G3X8Z7 Gm45199-201ENSMUST00000207640 1507 ntBASIC12.53□□□□□ -0.4
Chrna9G3X8Z7 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Chrna9G3X8Z7 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Chrna9G3X8Z7 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Chrna9G3X8Z7 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Chrna9G3X8Z7 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
Chrna9G3X8Z7 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
Chrna9G3X8Z7 Gm11783-201ENSMUST00000119549 885 ntBASIC12.53□□□□□ -0.4
Chrna9G3X8Z7 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Chrna9G3X8Z7 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Chrna9G3X8Z7 Mir7677-201ENSMUST00000184226 67 ntBASIC12.53□□□□□ -0.4
Chrna9G3X8Z7 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Chrna9G3X8Z7 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC12.53□□□□□ -0.4
Chrna9G3X8Z7 AC151275.1-201ENSMUST00000224870 585 ntBASIC12.53□□□□□ -0.4
Chrna9G3X8Z7 CT485787.1-201ENSMUST00000225617 968 ntBASIC12.53□□□□□ -0.4
Chrna9G3X8Z7 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Chrna9G3X8Z7 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
Chrna9G3X8Z7 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Chrna9G3X8Z7 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Chrna9G3X8Z7 Gm38140-201ENSMUST00000193617 2755 ntBASIC12.53□□□□□ -0.4
Chrna9G3X8Z7 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
Chrna9G3X8Z7 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Chrna9G3X8Z7 Gm13812-201ENSMUST00000118061 1347 ntBASIC12.53□□□□□ -0.4
Chrna9G3X8Z7 Gm13810-201ENSMUST00000118584 1347 ntBASIC12.53□□□□□ -0.4
Chrna9G3X8Z7 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Chrna9G3X8Z7 Gm29358-202ENSMUST00000187941 3227 ntBASIC12.53□□□□□ -0.4
Chrna9G3X8Z7 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Chrna9G3X8Z7 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Chrna9G3X8Z7 Gm13910-201ENSMUST00000121752 1428 ntBASIC12.53□□□□□ -0.4
Chrna9G3X8Z7 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Chrna9G3X8Z7 Gm44190-201ENSMUST00000205083 1401 ntBASIC12.53□□□□□ -0.4
Chrna9G3X8Z7 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Chrna9G3X8Z7 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Chrna9G3X8Z7 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Chrna9G3X8Z7 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
Chrna9G3X8Z7 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Chrna9G3X8Z7 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Chrna9G3X8Z7 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Chrna9G3X8Z7 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Chrna9G3X8Z7 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Chrna9G3X8Z7 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Chrna9G3X8Z7 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Chrna9G3X8Z7 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Chrna9G3X8Z7 CT010447.1-201ENSMUST00000225657 1608 ntBASIC12.52□□□□□ -0.4
Chrna9G3X8Z7 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Chrna9G3X8Z7 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Chrna9G3X8Z7 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Chrna9G3X8Z7 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Chrna9G3X8Z7 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Chrna9G3X8Z7 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Chrna9G3X8Z7 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC12.52□□□□□ -0.41
Chrna9G3X8Z7 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Chrna9G3X8Z7 Gm8459-201ENSMUST00000162504 760 ntBASIC12.52□□□□□ -0.41
Chrna9G3X8Z7 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC12.52□□□□□ -0.41
Chrna9G3X8Z7 Gm28071-201ENSMUST00000190355 478 ntBASIC12.52□□□□□ -0.41
Chrna9G3X8Z7 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Chrna9G3X8Z7 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Chrna9G3X8Z7 Gm9678-201ENSMUST00000198979 1149 ntBASIC12.52□□□□□ -0.41
Chrna9G3X8Z7 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC12.52□□□□□ -0.41
Chrna9G3X8Z7 AC102569.1-201ENSMUST00000221563 685 ntBASIC12.52□□□□□ -0.41
Chrna9G3X8Z7 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Chrna9G3X8Z7 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Chrna9G3X8Z7 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Chrna9G3X8Z7 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Chrna9G3X8Z7 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Chrna9G3X8Z7 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Chrna9G3X8Z7 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Chrna9G3X8Z7 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Chrna9G3X8Z7 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Chrna9G3X8Z7 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Chrna9G3X8Z7 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Chrna9G3X8Z7 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC12.52□□□□□ -0.41
Chrna9G3X8Z7 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Chrna9G3X8Z7 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Chrna9G3X8Z7 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Chrna9G3X8Z7 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Chrna9G3X8Z7 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Chrna9G3X8Z7 BC043934-202ENSMUST00000185694 2356 ntBASIC12.51□□□□□ -0.41
Chrna9G3X8Z7 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Chrna9G3X8Z7 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Chrna9G3X8Z7 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms