Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
NpcdF8VQB8 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NpcdF8VQB8 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NpcdF8VQB8 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NpcdF8VQB8 Trav10d-201ENSMUST00000103646 406 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
NpcdF8VQB8 Gm11783-201ENSMUST00000119549 885 ntBASIC14.13□□□□□ -0.15
NpcdF8VQB8 Gm11244-201ENSMUST00000121243 237 ntBASIC14.13□□□□□ -0.15
NpcdF8VQB8 Gm12246-201ENSMUST00000129126 503 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NpcdF8VQB8 Prr33-202ENSMUST00000151580 399 ntTSL 5 BASIC14.13□□□□□ -0.15
NpcdF8VQB8 Gm23675-201ENSMUST00000157311 125 ntBASIC14.13□□□□□ -0.15
NpcdF8VQB8 Gm26368-201ENSMUST00000157826 118 ntBASIC14.13□□□□□ -0.15
NpcdF8VQB8 Dydc1-202ENSMUST00000161837 829 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
NpcdF8VQB8 Gm17192-201ENSMUST00000169031 511 ntBASIC14.13□□□□□ -0.15
NpcdF8VQB8 Gm10100-201ENSMUST00000179726 363 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
NpcdF8VQB8 Mir133a-1hg-201ENSMUST00000179771 395 ntTSL 3 BASIC14.13□□□□□ -0.15
NpcdF8VQB8 Gm26647-201ENSMUST00000180816 1255 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NpcdF8VQB8 Gm28901-201ENSMUST00000188810 474 ntTSL 5 BASIC14.13□□□□□ -0.15
NpcdF8VQB8 Gm45592-201ENSMUST00000209605 1043 ntBASIC14.13□□□□□ -0.15
NpcdF8VQB8 Gm20735-202ENSMUST00000212387 519 ntTSL 2 BASIC14.13□□□□□ -0.15
NpcdF8VQB8 Gm17749-201ENSMUST00000216282 690 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NpcdF8VQB8 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NpcdF8VQB8 Krtap4-13-201ENSMUST00000050106 815 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
NpcdF8VQB8 Elob-201ENSMUST00000069579 508 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NpcdF8VQB8 AC130823.1-201ENSMUST00000228929 1549 ntBASIC14.13□□□□□ -0.15
NpcdF8VQB8 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NpcdF8VQB8 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
NpcdF8VQB8 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NpcdF8VQB8 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
NpcdF8VQB8 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
NpcdF8VQB8 Gm26632-201ENSMUST00000181120 1400 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NpcdF8VQB8 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NpcdF8VQB8 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NpcdF8VQB8 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
NpcdF8VQB8 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
NpcdF8VQB8 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NpcdF8VQB8 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NpcdF8VQB8 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC14.12□□□□□ -0.15
NpcdF8VQB8 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
NpcdF8VQB8 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
NpcdF8VQB8 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NpcdF8VQB8 Gm17213-201ENSMUST00000165161 1360 ntBASIC14.12□□□□□ -0.15
NpcdF8VQB8 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
NpcdF8VQB8 Gm18210-201ENSMUST00000209001 1524 ntBASIC14.12□□□□□ -0.15
NpcdF8VQB8 Mapk1ip1-201ENSMUST00000075667 1502 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NpcdF8VQB8 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NpcdF8VQB8 Gm6831-202ENSMUST00000213025 1673 ntBASIC14.12□□□□□ -0.15
NpcdF8VQB8 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
NpcdF8VQB8 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NpcdF8VQB8 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
NpcdF8VQB8 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC14.12□□□□□ -0.15
NpcdF8VQB8 Gm11957-201ENSMUST00000118304 779 ntBASIC14.12□□□□□ -0.15
NpcdF8VQB8 Gm9673-201ENSMUST00000119287 781 ntBASIC14.12□□□□□ -0.15
NpcdF8VQB8 Gm14234-201ENSMUST00000119539 845 ntBASIC14.12□□□□□ -0.15
NpcdF8VQB8 D3Ertd751e-204ENSMUST00000119572 1011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
NpcdF8VQB8 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NpcdF8VQB8 Gm25226-201ENSMUST00000158198 123 ntBASIC14.12□□□□□ -0.15
NpcdF8VQB8 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC14.12□□□□□ -0.15
NpcdF8VQB8 Nmbr-207ENSMUST00000190751 921 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NpcdF8VQB8 Cdipt-204ENSMUST00000206346 806 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NpcdF8VQB8 Gm45542-201ENSMUST00000210456 438 ntTSL 2 BASIC14.12□□□□□ -0.15
NpcdF8VQB8 Gm30671-201ENSMUST00000214898 318 ntBASIC14.12□□□□□ -0.15
NpcdF8VQB8 CT009546.1-201ENSMUST00000222573 1120 ntBASIC14.12□□□□□ -0.15
NpcdF8VQB8 Atp5j2-201ENSMUST00000037056 540 ntTSL 5 BASIC14.12□□□□□ -0.15
NpcdF8VQB8 A430010J10Rik-201ENSMUST00000054470 408 ntBASIC14.12□□□□□ -0.15
NpcdF8VQB8 Rpl3-201ENSMUST00000081650 1293 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NpcdF8VQB8 Gm23105-201ENSMUST00000083719 134 ntBASIC14.12□□□□□ -0.15
NpcdF8VQB8 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NpcdF8VQB8 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NpcdF8VQB8 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
NpcdF8VQB8 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NpcdF8VQB8 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
NpcdF8VQB8 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC14.12□□□□□ -0.15
NpcdF8VQB8 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NpcdF8VQB8 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC14.12□□□□□ -0.15
NpcdF8VQB8 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
NpcdF8VQB8 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
NpcdF8VQB8 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
NpcdF8VQB8 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NpcdF8VQB8 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NpcdF8VQB8 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
NpcdF8VQB8 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
NpcdF8VQB8 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
NpcdF8VQB8 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
NpcdF8VQB8 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NpcdF8VQB8 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
NpcdF8VQB8 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NpcdF8VQB8 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
NpcdF8VQB8 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NpcdF8VQB8 Rpsa-ps5-201ENSMUST00000121462 885 ntBASIC14.11□□□□□ -0.15
NpcdF8VQB8 Gm15620-201ENSMUST00000122949 270 ntBASIC14.11□□□□□ -0.15
NpcdF8VQB8 Hmgn2-208ENSMUST00000136327 772 ntTSL 2 BASIC14.11□□□□□ -0.15
NpcdF8VQB8 Uckl1os-207ENSMUST00000152365 442 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
NpcdF8VQB8 Gm45716-203ENSMUST00000153734 644 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
NpcdF8VQB8 1700057H21Rik-202ENSMUST00000154530 506 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
NpcdF8VQB8 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
NpcdF8VQB8 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NpcdF8VQB8 Gm5700-201ENSMUST00000191483 989 ntBASIC14.11□□□□□ -0.15
NpcdF8VQB8 Gm37826-201ENSMUST00000195329 322 ntBASIC14.11□□□□□ -0.15
NpcdF8VQB8 Gm45085-201ENSMUST00000209100 441 ntBASIC14.11□□□□□ -0.15
NpcdF8VQB8 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 69 ms