Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Gm7224-201ENSMUST00000121359 2066 ntBASIC10.96□□□□□ -0.65
Pcdh17E9PXF0 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Pcdh17E9PXF0 AC160410.1-201ENSMUST00000219298 1972 ntBASIC10.96□□□□□ -0.65
Pcdh17E9PXF0 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Pcdh17E9PXF0 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Pcdh17E9PXF0 Gm5053-201ENSMUST00000208361 1678 ntBASIC10.96□□□□□ -0.65
Pcdh17E9PXF0 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Pcdh17E9PXF0 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.65
Pcdh17E9PXF0 Gm43447-201ENSMUST00000198471 1535 ntBASIC10.96□□□□□ -0.65
Pcdh17E9PXF0 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Pcdh17E9PXF0 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Pcdh17E9PXF0 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Pcdh17E9PXF0 Gm3139-202ENSMUST00000201138 1303 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Pcdh17E9PXF0 Gm3183-203ENSMUST00000202911 1303 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Pcdh17E9PXF0 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Pcdh17E9PXF0 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC10.96□□□□□ -0.65
Pcdh17E9PXF0 Gm14314-201ENSMUST00000118225 1015 ntBASIC10.96□□□□□ -0.65
Pcdh17E9PXF0 Gm12208-201ENSMUST00000122004 163 ntBASIC10.96□□□□□ -0.65
Pcdh17E9PXF0 Gm14665-201ENSMUST00000122294 557 ntBASIC10.96□□□□□ -0.65
Pcdh17E9PXF0 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Pcdh17E9PXF0 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Pcdh17E9PXF0 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Pcdh17E9PXF0 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC10.96□□□□□ -0.65
Pcdh17E9PXF0 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Pcdh17E9PXF0 Gm22144-201ENSMUST00000157402 102 ntBASIC10.96□□□□□ -0.65
Pcdh17E9PXF0 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC10.96□□□□□ -0.65
Pcdh17E9PXF0 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Pcdh17E9PXF0 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Pcdh17E9PXF0 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Pcdh17E9PXF0 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC10.96□□□□□ -0.65
Pcdh17E9PXF0 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Pcdh17E9PXF0 Gm17831-201ENSMUST00000205579 900 ntBASIC10.96□□□□□ -0.65
Pcdh17E9PXF0 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Pcdh17E9PXF0 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC10.96□□□□□ -0.65
Pcdh17E9PXF0 AC159103.1-201ENSMUST00000228325 429 ntBASIC10.96□□□□□ -0.65
Pcdh17E9PXF0 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.65
Pcdh17E9PXF0 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Pcdh17E9PXF0 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
Pcdh17E9PXF0 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Pcdh17E9PXF0 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
Pcdh17E9PXF0 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Pcdh17E9PXF0 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Pcdh17E9PXF0 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
Pcdh17E9PXF0 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC10.96□□□□□ -0.66
Pcdh17E9PXF0 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
Pcdh17E9PXF0 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
Pcdh17E9PXF0 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC10.96□□□□□ -0.66
Pcdh17E9PXF0 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC10.95□□□□□ -0.66
Pcdh17E9PXF0 Gm6157-201ENSMUST00000199935 1897 ntBASIC10.95□□□□□ -0.66
Pcdh17E9PXF0 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdh17E9PXF0 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdh17E9PXF0 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdh17E9PXF0 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdh17E9PXF0 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC10.95□□□□□ -0.66
Pcdh17E9PXF0 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdh17E9PXF0 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdh17E9PXF0 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdh17E9PXF0 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdh17E9PXF0 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdh17E9PXF0 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC10.95□□□□□ -0.66
Pcdh17E9PXF0 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdh17E9PXF0 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdh17E9PXF0 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdh17E9PXF0 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdh17E9PXF0 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdh17E9PXF0 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdh17E9PXF0 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdh17E9PXF0 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC10.95□□□□□ -0.66
Pcdh17E9PXF0 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC10.95□□□□□ -0.66
Pcdh17E9PXF0 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdh17E9PXF0 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdh17E9PXF0 2810454H06Rik-201ENSMUST00000189942 3148 ntBASIC10.95□□□□□ -0.66
Pcdh17E9PXF0 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdh17E9PXF0 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC10.95□□□□□ -0.66
Pcdh17E9PXF0 Gm13888-201ENSMUST00000119148 422 ntBASIC10.95□□□□□ -0.66
Pcdh17E9PXF0 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Pcdh17E9PXF0 Gm14460-201ENSMUST00000121511 639 ntBASIC10.95□□□□□ -0.66
Pcdh17E9PXF0 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC10.95□□□□□ -0.66
Pcdh17E9PXF0 Gm7666-201ENSMUST00000146631 819 ntBASIC10.95□□□□□ -0.66
Pcdh17E9PXF0 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC10.95□□□□□ -0.66
Pcdh17E9PXF0 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
Pcdh17E9PXF0 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC10.95□□□□□ -0.66
Pcdh17E9PXF0 Gm4310-201ENSMUST00000177847 889 ntBASIC10.95□□□□□ -0.66
Pcdh17E9PXF0 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC10.95□□□□□ -0.66
Pcdh17E9PXF0 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdh17E9PXF0 Gm9132-201ENSMUST00000210182 832 ntBASIC10.95□□□□□ -0.66
Pcdh17E9PXF0 Gm45398-201ENSMUST00000210561 165 ntBASIC10.95□□□□□ -0.66
Pcdh17E9PXF0 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC10.95□□□□□ -0.66
Pcdh17E9PXF0 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdh17E9PXF0 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdh17E9PXF0 CT009713.8-202ENSMUST00000224732 385 ntBASIC10.95□□□□□ -0.66
Pcdh17E9PXF0 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdh17E9PXF0 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdh17E9PXF0 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdh17E9PXF0 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdh17E9PXF0 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Pcdh17E9PXF0 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdh17E9PXF0 Gm37542-201ENSMUST00000192563 2832 ntBASIC10.95□□□□□ -0.66
Pcdh17E9PXF0 Gm15991-202ENSMUST00000212123 3565 ntBASIC10.95□□□□□ -0.66
Pcdh17E9PXF0 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms