Protein–RNA interactions for Protein: Q9D7U6

Cldn22, Claudin-22, mousemouse

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn22Q9D7U6 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC11.81□□□□□ -0.52
Cldn22Q9D7U6 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Cldn22Q9D7U6 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Cldn22Q9D7U6 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cldn22Q9D7U6 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cldn22Q9D7U6 Gm22133-201ENSMUST00000102082 109 ntBASIC11.81□□□□□ -0.52
Cldn22Q9D7U6 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC11.81□□□□□ -0.52
Cldn22Q9D7U6 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Cldn22Q9D7U6 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC11.81□□□□□ -0.52
Cldn22Q9D7U6 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC11.81□□□□□ -0.52
Cldn22Q9D7U6 Gm15172-201ENSMUST00000118945 1046 ntBASIC11.81□□□□□ -0.52
Cldn22Q9D7U6 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC11.81□□□□□ -0.52
Cldn22Q9D7U6 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cldn22Q9D7U6 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cldn22Q9D7U6 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC11.81□□□□□ -0.52
Cldn22Q9D7U6 Gm18734-201ENSMUST00000172937 808 ntBASIC11.81□□□□□ -0.52
Cldn22Q9D7U6 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC11.81□□□□□ -0.52
Cldn22Q9D7U6 Gm34767-201ENSMUST00000191813 1062 ntBASIC11.81□□□□□ -0.52
Cldn22Q9D7U6 Gm43378-201ENSMUST00000199336 582 ntBASIC11.81□□□□□ -0.52
Cldn22Q9D7U6 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC11.81□□□□□ -0.52
Cldn22Q9D7U6 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC11.81□□□□□ -0.52
Cldn22Q9D7U6 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC11.81□□□□□ -0.52
Cldn22Q9D7U6 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cldn22Q9D7U6 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cldn22Q9D7U6 Gm5455-201ENSMUST00000058710 715 ntBASIC11.81□□□□□ -0.52
Cldn22Q9D7U6 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cldn22Q9D7U6 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cldn22Q9D7U6 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Cldn22Q9D7U6 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cldn22Q9D7U6 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cldn22Q9D7U6 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Cldn22Q9D7U6 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cldn22Q9D7U6 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Cldn22Q9D7U6 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cldn22Q9D7U6 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC11.81□□□□□ -0.52
Cldn22Q9D7U6 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Cldn22Q9D7U6 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cldn22Q9D7U6 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cldn22Q9D7U6 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Cldn22Q9D7U6 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Cldn22Q9D7U6 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cldn22Q9D7U6 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cldn22Q9D7U6 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC11.8□□□□□ -0.52
Cldn22Q9D7U6 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
Cldn22Q9D7U6 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cldn22Q9D7U6 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Cldn22Q9D7U6 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cldn22Q9D7U6 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cldn22Q9D7U6 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cldn22Q9D7U6 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC11.8□□□□□ -0.52
Cldn22Q9D7U6 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC11.8□□□□□ -0.52
Cldn22Q9D7U6 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC11.8□□□□□ -0.52
Cldn22Q9D7U6 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cldn22Q9D7U6 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC11.8□□□□□ -0.52
Cldn22Q9D7U6 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC11.8□□□□□ -0.52
Cldn22Q9D7U6 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC11.8□□□□□ -0.52
Cldn22Q9D7U6 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC11.8□□□□□ -0.52
Cldn22Q9D7U6 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC11.8□□□□□ -0.52
Cldn22Q9D7U6 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cldn22Q9D7U6 Gm43947-201ENSMUST00000203019 959 ntBASIC11.8□□□□□ -0.52
Cldn22Q9D7U6 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC11.8□□□□□ -0.52
Cldn22Q9D7U6 Gm8420-201ENSMUST00000097103 598 ntBASIC11.8□□□□□ -0.52
Cldn22Q9D7U6 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cldn22Q9D7U6 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cldn22Q9D7U6 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cldn22Q9D7U6 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC11.8□□□□□ -0.52
Cldn22Q9D7U6 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Cldn22Q9D7U6 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cldn22Q9D7U6 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC11.8□□□□□ -0.52
Cldn22Q9D7U6 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cldn22Q9D7U6 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Cldn22Q9D7U6 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cldn22Q9D7U6 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cldn22Q9D7U6 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cldn22Q9D7U6 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cldn22Q9D7U6 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cldn22Q9D7U6 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cldn22Q9D7U6 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC11.79□□□□□ -0.52
Cldn22Q9D7U6 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cldn22Q9D7U6 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cldn22Q9D7U6 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cldn22Q9D7U6 Gm43321-201ENSMUST00000198897 2409 ntBASIC11.79□□□□□ -0.52
Cldn22Q9D7U6 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC11.79□□□□□ -0.52
Cldn22Q9D7U6 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Cldn22Q9D7U6 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cldn22Q9D7U6 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cldn22Q9D7U6 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cldn22Q9D7U6 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC11.79□□□□□ -0.52
Cldn22Q9D7U6 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cldn22Q9D7U6 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cldn22Q9D7U6 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Cldn22Q9D7U6 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Cldn22Q9D7U6 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Cldn22Q9D7U6 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC11.79□□□□□ -0.52
Cldn22Q9D7U6 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cldn22Q9D7U6 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cldn22Q9D7U6 Gm5732-201ENSMUST00000182596 1007 ntBASIC11.79□□□□□ -0.52
Cldn22Q9D7U6 Gm27530-201ENSMUST00000184096 98 ntBASIC11.79□□□□□ -0.52
Cldn22Q9D7U6 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC11.79□□□□□ -0.52
Cldn22Q9D7U6 Gm5369-201ENSMUST00000217499 588 ntBASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms