Protein–RNA interactions for Protein: Q9CWU5

Khdc3, KH domain-containing protein 3, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc3Q9CWU5 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Khdc3Q9CWU5 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Khdc3Q9CWU5 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Khdc3Q9CWU5 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.6
Khdc3Q9CWU5 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Khdc3Q9CWU5 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC11.27□□□□□ -0.6
Khdc3Q9CWU5 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC11.27□□□□□ -0.6
Khdc3Q9CWU5 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Khdc3Q9CWU5 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC11.27□□□□□ -0.6
Khdc3Q9CWU5 Gm38194-201ENSMUST00000194529 2211 ntBASIC11.27□□□□□ -0.61
Khdc3Q9CWU5 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Khdc3Q9CWU5 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Khdc3Q9CWU5 Gm22133-201ENSMUST00000102082 109 ntBASIC11.27□□□□□ -0.61
Khdc3Q9CWU5 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Khdc3Q9CWU5 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Khdc3Q9CWU5 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Khdc3Q9CWU5 Gm27627-201ENSMUST00000183644 150 ntBASIC11.27□□□□□ -0.61
Khdc3Q9CWU5 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC11.27□□□□□ -0.61
Khdc3Q9CWU5 Gm5869-201ENSMUST00000200248 1257 ntBASIC11.27□□□□□ -0.61
Khdc3Q9CWU5 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC11.27□□□□□ -0.61
Khdc3Q9CWU5 Gm8913-201ENSMUST00000209491 641 ntBASIC11.27□□□□□ -0.61
Khdc3Q9CWU5 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC11.27□□□□□ -0.61
Khdc3Q9CWU5 Olfr1347-205ENSMUST00000220413 964 ntBASIC11.27□□□□□ -0.61
Khdc3Q9CWU5 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Khdc3Q9CWU5 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Khdc3Q9CWU5 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Khdc3Q9CWU5 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Khdc3Q9CWU5 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Khdc3Q9CWU5 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Khdc3Q9CWU5 AC122840.1-201ENSMUST00000220915 3334 ntBASIC11.27□□□□□ -0.61
Khdc3Q9CWU5 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Khdc3Q9CWU5 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Khdc3Q9CWU5 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Khdc3Q9CWU5 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Khdc3Q9CWU5 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Khdc3Q9CWU5 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Khdc3Q9CWU5 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Khdc3Q9CWU5 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Khdc3Q9CWU5 Gm43773-201ENSMUST00000198548 2162 ntBASIC11.27□□□□□ -0.61
Khdc3Q9CWU5 Plcd4-205ENSMUST00000113749 4648 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Khdc3Q9CWU5 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Khdc3Q9CWU5 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Khdc3Q9CWU5 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Khdc3Q9CWU5 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Khdc3Q9CWU5 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Khdc3Q9CWU5 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC11.27□□□□□ -0.61
Khdc3Q9CWU5 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
Khdc3Q9CWU5 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Khdc3Q9CWU5 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC11.26□□□□□ -0.61
Khdc3Q9CWU5 Zfp236-202ENSMUST00000182122 6059 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Khdc3Q9CWU5 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Khdc3Q9CWU5 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Khdc3Q9CWU5 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Khdc3Q9CWU5 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Khdc3Q9CWU5 Gm28719-201ENSMUST00000187779 1757 ntBASIC11.26□□□□□ -0.61
Khdc3Q9CWU5 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Khdc3Q9CWU5 AC122860.2-201ENSMUST00000217967 2671 ntBASIC11.26□□□□□ -0.61
Khdc3Q9CWU5 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Khdc3Q9CWU5 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Khdc3Q9CWU5 Gm43760-201ENSMUST00000202120 3015 ntBASIC11.26□□□□□ -0.61
Khdc3Q9CWU5 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Khdc3Q9CWU5 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Khdc3Q9CWU5 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC11.26□□□□□ -0.61
Khdc3Q9CWU5 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Khdc3Q9CWU5 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Khdc3Q9CWU5 Gm26286-201ENSMUST00000104166 134 ntBASIC11.26□□□□□ -0.61
Khdc3Q9CWU5 Gm13996-201ENSMUST00000118456 430 ntBASIC11.26□□□□□ -0.61
Khdc3Q9CWU5 Gm12749-201ENSMUST00000122138 1159 ntBASIC11.26□□□□□ -0.61
Khdc3Q9CWU5 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Khdc3Q9CWU5 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Khdc3Q9CWU5 Gm29615-201ENSMUST00000185371 697 ntBASIC11.26□□□□□ -0.61
Khdc3Q9CWU5 Gm28224-201ENSMUST00000186078 697 ntBASIC11.26□□□□□ -0.61
Khdc3Q9CWU5 Gm29001-201ENSMUST00000186177 697 ntBASIC11.26□□□□□ -0.61
Khdc3Q9CWU5 Gm28292-201ENSMUST00000186593 697 ntBASIC11.26□□□□□ -0.61
Khdc3Q9CWU5 Gm28101-201ENSMUST00000187608 697 ntBASIC11.26□□□□□ -0.61
Khdc3Q9CWU5 Gm29076-201ENSMUST00000187689 697 ntBASIC11.26□□□□□ -0.61
Khdc3Q9CWU5 Gm28302-201ENSMUST00000187931 697 ntBASIC11.26□□□□□ -0.61
Khdc3Q9CWU5 Gm28646-201ENSMUST00000188220 697 ntBASIC11.26□□□□□ -0.61
Khdc3Q9CWU5 Gm28205-201ENSMUST00000189177 697 ntBASIC11.26□□□□□ -0.61
Khdc3Q9CWU5 Gm29032-201ENSMUST00000189797 697 ntBASIC11.26□□□□□ -0.61
Khdc3Q9CWU5 Gm28695-201ENSMUST00000190300 697 ntBASIC11.26□□□□□ -0.61
Khdc3Q9CWU5 Gm37448-201ENSMUST00000192795 697 ntBASIC11.26□□□□□ -0.61
Khdc3Q9CWU5 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC11.26□□□□□ -0.61
Khdc3Q9CWU5 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC11.26□□□□□ -0.61
Khdc3Q9CWU5 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC11.26□□□□□ -0.61
Khdc3Q9CWU5 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC11.26□□□□□ -0.61
Khdc3Q9CWU5 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Khdc3Q9CWU5 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC11.26□□□□□ -0.61
Khdc3Q9CWU5 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Khdc3Q9CWU5 Myh13-201ENSMUST00000081911 5817 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Khdc3Q9CWU5 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Khdc3Q9CWU5 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Khdc3Q9CWU5 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Khdc3Q9CWU5 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Khdc3Q9CWU5 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC11.26□□□□□ -0.61
Khdc3Q9CWU5 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC11.26□□□□□ -0.61
Khdc3Q9CWU5 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Khdc3Q9CWU5 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Khdc3Q9CWU5 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Khdc3Q9CWU5 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC11.26□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms