Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 AC091458.1-201ENSMUST00000220902 1361 ntBASIC13.76□□□□□ -0.21
Smc3Q9CW03 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
Smc3Q9CW03 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Smc3Q9CW03 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Smc3Q9CW03 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Smc3Q9CW03 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smc3Q9CW03 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Smc3Q9CW03 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smc3Q9CW03 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smc3Q9CW03 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Smc3Q9CW03 Mir7085-201ENSMUST00000184353 66 ntBASIC13.76□□□□□ -0.21
Smc3Q9CW03 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC13.76□□□□□ -0.21
Smc3Q9CW03 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC13.76□□□□□ -0.21
Smc3Q9CW03 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC13.76□□□□□ -0.21
Smc3Q9CW03 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC13.76□□□□□ -0.21
Smc3Q9CW03 Lect2-202ENSMUST00000225183 823 ntBASIC13.76□□□□□ -0.21
Smc3Q9CW03 AC121960.1-201ENSMUST00000227982 564 ntBASIC13.76□□□□□ -0.21
Smc3Q9CW03 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smc3Q9CW03 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smc3Q9CW03 Gm10478-201ENSMUST00000084451 396 ntBASIC13.76□□□□□ -0.21
Smc3Q9CW03 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smc3Q9CW03 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smc3Q9CW03 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smc3Q9CW03 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smc3Q9CW03 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smc3Q9CW03 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC13.76□□□□□ -0.21
Smc3Q9CW03 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smc3Q9CW03 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Smc3Q9CW03 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC13.76□□□□□ -0.21
Smc3Q9CW03 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Smc3Q9CW03 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC13.76□□□□□ -0.21
Smc3Q9CW03 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Smc3Q9CW03 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Smc3Q9CW03 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smc3Q9CW03 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Smc3Q9CW03 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smc3Q9CW03 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smc3Q9CW03 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smc3Q9CW03 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Smc3Q9CW03 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smc3Q9CW03 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Smc3Q9CW03 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Smc3Q9CW03 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
Smc3Q9CW03 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smc3Q9CW03 Gm7964-201ENSMUST00000051522 1378 ntBASIC13.75□□□□□ -0.21
Smc3Q9CW03 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Smc3Q9CW03 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smc3Q9CW03 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Smc3Q9CW03 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC13.75□□□□□ -0.21
Smc3Q9CW03 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smc3Q9CW03 Gm15004-201ENSMUST00000119192 630 ntBASIC13.75□□□□□ -0.21
Smc3Q9CW03 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Smc3Q9CW03 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC13.75□□□□□ -0.21
Smc3Q9CW03 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC13.75□□□□□ -0.21
Smc3Q9CW03 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC13.75□□□□□ -0.21
Smc3Q9CW03 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Smc3Q9CW03 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Smc3Q9CW03 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC13.75□□□□□ -0.21
Smc3Q9CW03 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC13.75□□□□□ -0.21
Smc3Q9CW03 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC13.75□□□□□ -0.21
Smc3Q9CW03 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Smc3Q9CW03 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smc3Q9CW03 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smc3Q9CW03 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC13.75□□□□□ -0.21
Smc3Q9CW03 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smc3Q9CW03 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smc3Q9CW03 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC13.75□□□□□ -0.21
Smc3Q9CW03 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smc3Q9CW03 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC13.75□□□□□ -0.21
Smc3Q9CW03 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Smc3Q9CW03 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smc3Q9CW03 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smc3Q9CW03 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smc3Q9CW03 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smc3Q9CW03 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smc3Q9CW03 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Smc3Q9CW03 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smc3Q9CW03 AC123619.2-202ENSMUST00000225097 1568 ntBASIC13.75□□□□□ -0.21
Smc3Q9CW03 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smc3Q9CW03 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smc3Q9CW03 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC13.74□□□□□ -0.21
Smc3Q9CW03 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smc3Q9CW03 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smc3Q9CW03 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Smc3Q9CW03 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smc3Q9CW03 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Smc3Q9CW03 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smc3Q9CW03 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smc3Q9CW03 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smc3Q9CW03 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Smc3Q9CW03 Gm8862-201ENSMUST00000198379 1346 ntBASIC13.74□□□□□ -0.21
Smc3Q9CW03 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Smc3Q9CW03 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Smc3Q9CW03 Gm11439-201ENSMUST00000118598 409 ntBASIC13.74□□□□□ -0.21
Smc3Q9CW03 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC13.74□□□□□ -0.21
Smc3Q9CW03 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Smc3Q9CW03 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Smc3Q9CW03 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Smc3Q9CW03 Gm27516-201ENSMUST00000184237 98 ntBASIC13.74□□□□□ -0.21
Smc3Q9CW03 Gm8885-201ENSMUST00000189382 598 ntBASIC13.74□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms