Protein–RNA interactions for Protein: Q9CUB6

Otud1, OTU domain-containing protein 1, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otud1Q9CUB6 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC11.23□□□□□ -0.61
Otud1Q9CUB6 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Otud1Q9CUB6 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Otud1Q9CUB6 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Otud1Q9CUB6 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Otud1Q9CUB6 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Otud1Q9CUB6 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Otud1Q9CUB6 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Otud1Q9CUB6 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC11.22□□□□□ -0.61
Otud1Q9CUB6 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
Otud1Q9CUB6 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC11.22□□□□□ -0.61
Otud1Q9CUB6 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Otud1Q9CUB6 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Otud1Q9CUB6 Gm14724-201ENSMUST00000118400 537 ntBASIC11.22□□□□□ -0.61
Otud1Q9CUB6 Gm11941-201ENSMUST00000119904 610 ntBASIC11.22□□□□□ -0.61
Otud1Q9CUB6 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Otud1Q9CUB6 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Otud1Q9CUB6 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Otud1Q9CUB6 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC11.22□□□□□ -0.61
Otud1Q9CUB6 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Otud1Q9CUB6 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC11.22□□□□□ -0.61
Otud1Q9CUB6 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Otud1Q9CUB6 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Otud1Q9CUB6 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC11.22□□□□□ -0.61
Otud1Q9CUB6 Gm34767-201ENSMUST00000191813 1062 ntBASIC11.22□□□□□ -0.61
Otud1Q9CUB6 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Otud1Q9CUB6 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC11.22□□□□□ -0.61
Otud1Q9CUB6 Gm2965-201ENSMUST00000198365 343 ntBASIC11.22□□□□□ -0.61
Otud1Q9CUB6 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Otud1Q9CUB6 Gm42997-202ENSMUST00000200321 985 ntBASIC11.22□□□□□ -0.61
Otud1Q9CUB6 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Otud1Q9CUB6 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Otud1Q9CUB6 Gm45118-201ENSMUST00000208928 825 ntBASIC11.22□□□□□ -0.61
Otud1Q9CUB6 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Otud1Q9CUB6 Olfr907-202ENSMUST00000214003 1235 ntAPPRIS P1 TSL 3 BASIC11.22□□□□□ -0.61
Otud1Q9CUB6 AC113082.1-201ENSMUST00000217324 327 ntBASIC11.22□□□□□ -0.61
Otud1Q9CUB6 Gm1000-201ENSMUST00000220520 801 ntTSL 3 BASIC11.22□□□□□ -0.61
Otud1Q9CUB6 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Otud1Q9CUB6 Olfr907-201ENSMUST00000052901 933 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Otud1Q9CUB6 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Otud1Q9CUB6 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Otud1Q9CUB6 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Otud1Q9CUB6 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Otud1Q9CUB6 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Otud1Q9CUB6 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Otud1Q9CUB6 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Otud1Q9CUB6 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Otud1Q9CUB6 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Otud1Q9CUB6 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Otud1Q9CUB6 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Otud1Q9CUB6 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Otud1Q9CUB6 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Otud1Q9CUB6 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC11.21□□□□□ -0.61
Otud1Q9CUB6 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Otud1Q9CUB6 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Otud1Q9CUB6 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Otud1Q9CUB6 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Otud1Q9CUB6 Asb11-201ENSMUST00000033755 1369 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Otud1Q9CUB6 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Otud1Q9CUB6 Gm24891-201ENSMUST00000104391 136 ntBASIC11.21□□□□□ -0.61
Otud1Q9CUB6 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC11.21□□□□□ -0.61
Otud1Q9CUB6 Gm13255-201ENSMUST00000117255 547 ntBASIC11.21□□□□□ -0.61
Otud1Q9CUB6 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC11.21□□□□□ -0.61
Otud1Q9CUB6 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC11.21□□□□□ -0.61
Otud1Q9CUB6 Gm2012-202ENSMUST00000163263 892 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Otud1Q9CUB6 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC11.21□□□□□ -0.61
Otud1Q9CUB6 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC11.21□□□□□ -0.61
Otud1Q9CUB6 Gm38117-201ENSMUST00000194653 939 ntBASIC11.21□□□□□ -0.61
Otud1Q9CUB6 Gm18660-201ENSMUST00000199542 629 ntBASIC11.21□□□□□ -0.61
Otud1Q9CUB6 Gm43947-201ENSMUST00000203019 959 ntBASIC11.21□□□□□ -0.61
Otud1Q9CUB6 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC11.21□□□□□ -0.61
Otud1Q9CUB6 Gm8959-201ENSMUST00000213150 571 ntBASIC11.21□□□□□ -0.61
Otud1Q9CUB6 Olfr967-202ENSMUST00000213358 1210 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Otud1Q9CUB6 Ntng1-201ENSMUST00000051253 327 ntBASIC11.21□□□□□ -0.61
Otud1Q9CUB6 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Otud1Q9CUB6 Tas2r121-201ENSMUST00000095395 918 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Otud1Q9CUB6 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Otud1Q9CUB6 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Otud1Q9CUB6 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Otud1Q9CUB6 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Otud1Q9CUB6 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Otud1Q9CUB6 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC11.21□□□□□ -0.62
Otud1Q9CUB6 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC11.21□□□□□ -0.62
Otud1Q9CUB6 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Otud1Q9CUB6 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.62
Otud1Q9CUB6 Gm43051-201ENSMUST00000201096 2678 ntBASIC11.21□□□□□ -0.62
Otud1Q9CUB6 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Otud1Q9CUB6 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Otud1Q9CUB6 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Otud1Q9CUB6 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Otud1Q9CUB6 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Otud1Q9CUB6 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Otud1Q9CUB6 0610040B10Rik-203ENSMUST00000198455 1643 ntBASIC11.2□□□□□ -0.62
Otud1Q9CUB6 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Otud1Q9CUB6 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Otud1Q9CUB6 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Otud1Q9CUB6 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Otud1Q9CUB6 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Otud1Q9CUB6 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Otud1Q9CUB6 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms