Protein–RNA interactions for Protein: Q99PM3

Gtf2a1, Transcription initiation factor IIA subunit 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2a1Q99PM3 Slc26a1-204ENSMUST00000163328 3015 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gtf2a1Q99PM3 Xpnpep3-201ENSMUST00000041609 3236 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Gtf2a1Q99PM3 Gm26815-201ENSMUST00000181200 3366 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Gtf2a1Q99PM3 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gtf2a1Q99PM3 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gtf2a1Q99PM3 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC12.76□□□□□ -0.37
Gtf2a1Q99PM3 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC12.76□□□□□ -0.37
Gtf2a1Q99PM3 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC12.76□□□□□ -0.37
Gtf2a1Q99PM3 Gm10459-201ENSMUST00000202708 1155 ntBASIC12.76□□□□□ -0.37
Gtf2a1Q99PM3 AC153929.1-201ENSMUST00000219009 303 ntBASIC12.76□□□□□ -0.37
Gtf2a1Q99PM3 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gtf2a1Q99PM3 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gtf2a1Q99PM3 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gtf2a1Q99PM3 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gtf2a1Q99PM3 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Gtf2a1Q99PM3 Sec24d-201ENSMUST00000047923 3903 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gtf2a1Q99PM3 9130221F21Rik-201ENSMUST00000206867 2631 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Gtf2a1Q99PM3 Anks1b-233ENSMUST00000183156 4248 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Gtf2a1Q99PM3 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Gtf2a1Q99PM3 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Gtf2a1Q99PM3 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gtf2a1Q99PM3 Tmem63a-205ENSMUST00000161523 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gtf2a1Q99PM3 Dpf2-205ENSMUST00000136983 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gtf2a1Q99PM3 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gtf2a1Q99PM3 AC123534.1-202ENSMUST00000224256 1837 ntBASIC12.76□□□□□ -0.37
Gtf2a1Q99PM3 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gtf2a1Q99PM3 Nt5c1b-217ENSMUST00000219826 2023 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Gtf2a1Q99PM3 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gtf2a1Q99PM3 Gm32552-201ENSMUST00000217849 2291 ntTSL 5 BASIC12.76□□□□□ -0.37
Gtf2a1Q99PM3 Ptbp3-202ENSMUST00000102883 3409 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
Gtf2a1Q99PM3 Pcdhgb8-201ENSMUST00000195764 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Gtf2a1Q99PM3 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC12.75□□□□□ -0.37
Gtf2a1Q99PM3 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Gtf2a1Q99PM3 Kat7-204ENSMUST00000107733 3470 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Gtf2a1Q99PM3 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Gtf2a1Q99PM3 Xirp1-201ENSMUST00000111635 5839 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Gtf2a1Q99PM3 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Gtf2a1Q99PM3 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC12.75□□□□□ -0.37
Gtf2a1Q99PM3 Fhod1-201ENSMUST00000014922 3928 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Gtf2a1Q99PM3 Syncrip-207ENSMUST00000174269 3286 ntTSL 5 BASIC12.75□□□□□ -0.37
Gtf2a1Q99PM3 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC12.75□□□□□ -0.37
Gtf2a1Q99PM3 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Gtf2a1Q99PM3 1500012K07Rik-201ENSMUST00000181846 2345 ntTSL 5 BASIC12.75□□□□□ -0.37
Gtf2a1Q99PM3 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC12.75□□□□□ -0.37
Gtf2a1Q99PM3 Tada2a-201ENSMUST00000018795 2151 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Gtf2a1Q99PM3 Pfkfb3-216ENSMUST00000191668 2216 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Gtf2a1Q99PM3 Gm17968-201ENSMUST00000194902 784 ntBASIC12.75□□□□□ -0.37
Gtf2a1Q99PM3 Gm43447-201ENSMUST00000198471 1535 ntBASIC12.75□□□□□ -0.37
Gtf2a1Q99PM3 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Gtf2a1Q99PM3 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC12.75□□□□□ -0.37
Gtf2a1Q99PM3 Gm7183-201ENSMUST00000213870 1005 ntBASIC12.75□□□□□ -0.37
Gtf2a1Q99PM3 Ribc2-201ENSMUST00000023067 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Gtf2a1Q99PM3 Slc23a2-201ENSMUST00000028815 6364 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Gtf2a1Q99PM3 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Gtf2a1Q99PM3 Aasdhppt-201ENSMUST00000051589 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Gtf2a1Q99PM3 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Gtf2a1Q99PM3 Siglech-201ENSMUST00000060416 2138 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Gtf2a1Q99PM3 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Gtf2a1Q99PM3 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Gtf2a1Q99PM3 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Gtf2a1Q99PM3 Pcdh11x-202ENSMUST00000113358 8607 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
Gtf2a1Q99PM3 Pdp2-201ENSMUST00000059588 5692 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Gtf2a1Q99PM3 Ndn-201ENSMUST00000038775 3694 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Gtf2a1Q99PM3 Gfm2-208ENSMUST00000161639 3157 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Gtf2a1Q99PM3 Ltbp1-203ENSMUST00000112516 5140 ntAPPRIS P3 TSL 5 BASIC12.75□□□□□ -0.37
Gtf2a1Q99PM3 Tom1l2-206ENSMUST00000102683 4999 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Gtf2a1Q99PM3 AC144938.1-201ENSMUST00000223994 2167 ntBASIC12.74□□□□□ -0.37
Gtf2a1Q99PM3 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
Gtf2a1Q99PM3 1700126A01Rik-201ENSMUST00000185283 2061 ntBASIC12.74□□□□□ -0.37
Gtf2a1Q99PM3 Olfr1512-202ENSMUST00000214980 2082 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Gtf2a1Q99PM3 Gm9866-205ENSMUST00000220998 1973 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Gtf2a1Q99PM3 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Gtf2a1Q99PM3 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Gtf2a1Q99PM3 Eif2ak4-203ENSMUST00000110869 1715 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Gtf2a1Q99PM3 Gm5441-201ENSMUST00000186454 5181 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Gtf2a1Q99PM3 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Gtf2a1Q99PM3 Slf2-201ENSMUST00000096053 6880 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Gtf2a1Q99PM3 Gm31108-201ENSMUST00000204101 1633 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Gtf2a1Q99PM3 Phf8-211ENSMUST00000168501 6359 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Gtf2a1Q99PM3 Atg2a-201ENSMUST00000045351 6371 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Gtf2a1Q99PM3 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Gtf2a1Q99PM3 Olfr1395-203ENSMUST00000214195 2984 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Gtf2a1Q99PM3 Slc6a16-203ENSMUST00000213347 2865 ntAPPRIS P5 TSL 5 BASIC12.74□□□□□ -0.37
Gtf2a1Q99PM3 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Gtf2a1Q99PM3 Gm26751-201ENSMUST00000181218 4245 ntTSL 5 BASIC12.74□□□□□ -0.37
Gtf2a1Q99PM3 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Gtf2a1Q99PM3 Casq2-201ENSMUST00000029454 2556 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Gtf2a1Q99PM3 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC12.74□□□□□ -0.37
Gtf2a1Q99PM3 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Gtf2a1Q99PM3 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Gtf2a1Q99PM3 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Gtf2a1Q99PM3 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC12.74□□□□□ -0.37
Gtf2a1Q99PM3 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC12.74□□□□□ -0.37
Gtf2a1Q99PM3 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
Gtf2a1Q99PM3 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC12.74□□□□□ -0.37
Gtf2a1Q99PM3 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC12.74□□□□□ -0.37
Gtf2a1Q99PM3 AC132467.2-201ENSMUST00000226306 2253 ntBASIC12.74□□□□□ -0.37
Gtf2a1Q99PM3 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Gtf2a1Q99PM3 Alppl2-201ENSMUST00000027455 2092 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Gtf2a1Q99PM3 Lrtm1-203ENSMUST00000224760 3060 ntBASIC12.74□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 57.7 ms