Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Arhgap19-204ENSMUST00000177495 1652 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Cdh23Q99PF4 Gm12606-202ENSMUST00000129527 1184 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Cdh23Q99PF4 Gm12853-201ENSMUST00000134971 442 ntTSL 3 BASIC11.58□□□□□ -0.56
Cdh23Q99PF4 Gm23432-201ENSMUST00000157181 131 ntBASIC11.58□□□□□ -0.56
Cdh23Q99PF4 Gm20495-201ENSMUST00000173902 235 ntBASIC11.58□□□□□ -0.56
Cdh23Q99PF4 Gm6114-201ENSMUST00000182472 968 ntBASIC11.58□□□□□ -0.56
Cdh23Q99PF4 Gm29067-201ENSMUST00000190821 470 ntBASIC11.58□□□□□ -0.56
Cdh23Q99PF4 Rpl37-201ENSMUST00000045356 835 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cdh23Q99PF4 Ccl27a-201ENSMUST00000074387 405 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cdh23Q99PF4 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cdh23Q99PF4 Gm20758-201ENSMUST00000220339 2171 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Cdh23Q99PF4 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cdh23Q99PF4 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cdh23Q99PF4 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Cdh23Q99PF4 Ifitm7-201ENSMUST00000117803 853 ntAPPRIS P5 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cdh23Q99PF4 Gm8302-201ENSMUST00000119217 852 ntBASIC11.58□□□□□ -0.56
Cdh23Q99PF4 Gm16619-201ENSMUST00000181817 1210 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Cdh23Q99PF4 Tbc1d24-211ENSMUST00000201583 893 ntTSL 5 BASIC11.58□□□□□ -0.56
Cdh23Q99PF4 Gm33016-201ENSMUST00000221224 677 ntTSL 3 BASIC11.58□□□□□ -0.56
Cdh23Q99PF4 Fthl17a-201ENSMUST00000048382 835 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cdh23Q99PF4 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cdh23Q99PF4 Epha6-203ENSMUST00000161358 1356 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Cdh23Q99PF4 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Cdh23Q99PF4 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Cdh23Q99PF4 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC11.58□□□□□ -0.56
Cdh23Q99PF4 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC11.58□□□□□ -0.56
Cdh23Q99PF4 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Cdh23Q99PF4 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cdh23Q99PF4 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cdh23Q99PF4 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cdh23Q99PF4 Lyrm1-202ENSMUST00000106516 1069 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cdh23Q99PF4 2700099C18Rik-203ENSMUST00000182475 969 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Cdh23Q99PF4 Mir7088-201ENSMUST00000184227 86 ntBASIC11.58□□□□□ -0.56
Cdh23Q99PF4 Gm36980-201ENSMUST00000195643 622 ntBASIC11.58□□□□□ -0.56
Cdh23Q99PF4 Gm44498-201ENSMUST00000199509 111 ntBASIC11.58□□□□□ -0.56
Cdh23Q99PF4 Rpl15-ps5-201ENSMUST00000205636 605 ntBASIC11.58□□□□□ -0.56
Cdh23Q99PF4 Gm7727-201ENSMUST00000219830 671 ntBASIC11.58□□□□□ -0.56
Cdh23Q99PF4 Hesx1-202ENSMUST00000224331 983 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Cdh23Q99PF4 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cdh23Q99PF4 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cdh23Q99PF4 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cdh23Q99PF4 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cdh23Q99PF4 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cdh23Q99PF4 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Cdh23Q99PF4 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC11.57□□□□□ -0.56
Cdh23Q99PF4 Defa-ps16-201ENSMUST00000121939 171 ntBASIC11.57□□□□□ -0.56
Cdh23Q99PF4 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC11.57□□□□□ -0.56
Cdh23Q99PF4 4930505M18Rik-201ENSMUST00000175854 1288 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Cdh23Q99PF4 Tcstv1-201ENSMUST00000178510 1280 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Cdh23Q99PF4 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Cdh23Q99PF4 Gm44540-201ENSMUST00000205640 354 ntBASIC11.57□□□□□ -0.56
Cdh23Q99PF4 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cdh23Q99PF4 Gm43102-201ENSMUST00000201004 2324 ntBASIC11.57□□□□□ -0.56
Cdh23Q99PF4 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC11.57□□□□□ -0.56
Cdh23Q99PF4 Matn2-203ENSMUST00000226766 3252 ntBASIC11.57□□□□□ -0.56
Cdh23Q99PF4 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cdh23Q99PF4 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cdh23Q99PF4 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Cdh23Q99PF4 Ass1-201ENSMUST00000102840 1696 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cdh23Q99PF4 Cd19-201ENSMUST00000032968 2432 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cdh23Q99PF4 4933438A12Rik-201ENSMUST00000144579 1013 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Cdh23Q99PF4 Madcam1-202ENSMUST00000217748 944 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cdh23Q99PF4 AC163638.2-201ENSMUST00000224920 827 ntBASIC11.57□□□□□ -0.56
Cdh23Q99PF4 Fibp-205ENSMUST00000225141 1209 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Cdh23Q99PF4 Olfr1395-201ENSMUST00000059379 954 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Cdh23Q99PF4 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cdh23Q99PF4 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cdh23Q99PF4 4930579F01Rik-202ENSMUST00000199293 1598 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Cdh23Q99PF4 Gm44740-201ENSMUST00000205603 1614 ntBASIC11.57□□□□□ -0.56
Cdh23Q99PF4 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Cdh23Q99PF4 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cdh23Q99PF4 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC11.57□□□□□ -0.56
Cdh23Q99PF4 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cdh23Q99PF4 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cdh23Q99PF4 Il1rn-202ENSMUST00000114485 728 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Cdh23Q99PF4 Olfr29-ps1-201ENSMUST00000117959 963 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Cdh23Q99PF4 Gstt3-203ENSMUST00000173537 687 ntTSL 3 BASIC11.56□□□□□ -0.56
Cdh23Q99PF4 Gm19927-201ENSMUST00000185792 781 ntBASIC11.56□□□□□ -0.56
Cdh23Q99PF4 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cdh23Q99PF4 Gm5053-201ENSMUST00000208361 1678 ntBASIC11.56□□□□□ -0.56
Cdh23Q99PF4 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Cdh23Q99PF4 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cdh23Q99PF4 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC11.56□□□□□ -0.56
Cdh23Q99PF4 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cdh23Q99PF4 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Cdh23Q99PF4 Mir705-201ENSMUST00000102058 82 ntBASIC11.56□□□□□ -0.56
Cdh23Q99PF4 Oprm1-213ENSMUST00000105604 1616 ntAPPRIS ALT1 TSL 5 BASIC11.56□□□□□ -0.56
Cdh23Q99PF4 Nprl3-202ENSMUST00000109389 1642 ntAPPRIS ALT1 TSL 5 BASIC11.56□□□□□ -0.56
Cdh23Q99PF4 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Cdh23Q99PF4 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cdh23Q99PF4 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cdh23Q99PF4 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cdh23Q99PF4 A930003O13Rik-202ENSMUST00000197486 3098 ntBASIC11.56□□□□□ -0.56
Cdh23Q99PF4 Gm42908-201ENSMUST00000197508 870 ntBASIC11.56□□□□□ -0.56
Cdh23Q99PF4 Gm44304-201ENSMUST00000200509 145 ntBASIC11.56□□□□□ -0.56
Cdh23Q99PF4 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Cdh23Q99PF4 AC166902.2-202ENSMUST00000213191 1038 ntTSL 5 BASIC11.56□□□□□ -0.56
Cdh23Q99PF4 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cdh23Q99PF4 AC158777.1-201ENSMUST00000226216 1724 ntBASIC11.56□□□□□ -0.56
Cdh23Q99PF4 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms