Protein–RNA interactions for Protein: Q99PE5

Smim3, Small integral membrane protein 3, mousemouse

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim3Q99PE5 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Smim3Q99PE5 Abhd18-201ENSMUST00000108077 3277 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Smim3Q99PE5 Thbs4-201ENSMUST00000022213 3198 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Smim3Q99PE5 Flad1-204ENSMUST00000129308 2892 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Smim3Q99PE5 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Smim3Q99PE5 Gm11033-203ENSMUST00000156185 2321 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Smim3Q99PE5 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Smim3Q99PE5 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Smim3Q99PE5 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC9.94□□□□□ -0.82
Smim3Q99PE5 Kdm4a-204ENSMUST00000106406 4663 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Smim3Q99PE5 Pde5a-201ENSMUST00000066728 6939 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Smim3Q99PE5 Atg9a-205ENSMUST00000188347 4041 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Smim3Q99PE5 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Smim3Q99PE5 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC9.94□□□□□ -0.82
Smim3Q99PE5 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC9.94□□□□□ -0.82
Smim3Q99PE5 Gm11700-201ENSMUST00000119409 403 ntBASIC9.94□□□□□ -0.82
Smim3Q99PE5 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC9.94□□□□□ -0.82
Smim3Q99PE5 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Smim3Q99PE5 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
Smim3Q99PE5 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Smim3Q99PE5 Gm44855-201ENSMUST00000205725 362 ntBASIC9.94□□□□□ -0.82
Smim3Q99PE5 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC9.94□□□□□ -0.82
Smim3Q99PE5 Gm2824-203ENSMUST00000226189 1228 ntBASIC9.94□□□□□ -0.82
Smim3Q99PE5 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Smim3Q99PE5 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC9.94□□□□□ -0.82
Smim3Q99PE5 Gm10076-201ENSMUST00000073238 384 ntBASIC9.94□□□□□ -0.82
Smim3Q99PE5 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Smim3Q99PE5 Ddr1-212ENSMUST00000166980 3627 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Smim3Q99PE5 Scn10a-204ENSMUST00000214408 5877 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Smim3Q99PE5 Dclk1-204ENSMUST00000196745 7962 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Smim3Q99PE5 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Smim3Q99PE5 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Smim3Q99PE5 Tmcc2-201ENSMUST00000045473 3410 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Smim3Q99PE5 AC165351.1-201ENSMUST00000219078 2020 ntBASIC9.94□□□□□ -0.82
Smim3Q99PE5 Gm5740-201ENSMUST00000211003 1857 ntBASIC9.93□□□□□ -0.82
Smim3Q99PE5 Tmem184a-202ENSMUST00000110832 4326 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
Smim3Q99PE5 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Smim3Q99PE5 Gpr68-201ENSMUST00000053668 3099 ntAPPRIS P1 TSL 2 BASIC9.93□□□□□ -0.82
Smim3Q99PE5 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Smim3Q99PE5 Gm10463-202ENSMUST00000195772 2889 ntBASIC9.93□□□□□ -0.82
Smim3Q99PE5 Rpap1-201ENSMUST00000048493 4744 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Smim3Q99PE5 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Smim3Q99PE5 Lman1-201ENSMUST00000048260 3563 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Smim3Q99PE5 Sh2d5-201ENSMUST00000105823 3529 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Smim3Q99PE5 Mon2-201ENSMUST00000037557 5511 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
Smim3Q99PE5 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC9.93□□□□□ -0.82
Smim3Q99PE5 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Smim3Q99PE5 Gm40617-201ENSMUST00000218840 2420 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Smim3Q99PE5 Kcnk5-201ENSMUST00000024011 3392 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Smim3Q99PE5 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC9.93□□□□□ -0.82
Smim3Q99PE5 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC9.93□□□□□ -0.82
Smim3Q99PE5 Magee2-201ENSMUST00000033575 2316 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
Smim3Q99PE5 Xirp1-201ENSMUST00000111635 5839 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Smim3Q99PE5 Arsb-201ENSMUST00000091403 4038 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Smim3Q99PE5 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Smim3Q99PE5 Psd-202ENSMUST00000096029 3903 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
Smim3Q99PE5 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Smim3Q99PE5 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Smim3Q99PE5 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC9.93□□□□□ -0.82
Smim3Q99PE5 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Smim3Q99PE5 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC9.93□□□□□ -0.82
Smim3Q99PE5 Gm44405-201ENSMUST00000198952 126 ntBASIC9.93□□□□□ -0.82
Smim3Q99PE5 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Smim3Q99PE5 Gm39404-201ENSMUST00000216350 313 ntBASIC9.93□□□□□ -0.82
Smim3Q99PE5 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC9.93□□□□□ -0.82
Smim3Q99PE5 AC155237.1-201ENSMUST00000226196 1279 ntBASIC9.93□□□□□ -0.82
Smim3Q99PE5 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Smim3Q99PE5 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Smim3Q99PE5 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC9.93□□□□□ -0.82
Smim3Q99PE5 Ppp1r26-205ENSMUST00000189694 5463 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Smim3Q99PE5 Ppp1r26-201ENSMUST00000040324 5466 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Smim3Q99PE5 Sept9-203ENSMUST00000100193 2924 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
Smim3Q99PE5 Rbbp5-202ENSMUST00000187505 1977 ntTSL 5 BASIC9.93□□□□□ -0.82
Smim3Q99PE5 Slc4a9-201ENSMUST00000074298 2714 ntAPPRIS P3 TSL 5 BASIC9.93□□□□□ -0.82
Smim3Q99PE5 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Smim3Q99PE5 Atxn7l1-204ENSMUST00000125192 2644 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
Smim3Q99PE5 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC9.93□□□□□ -0.82
Smim3Q99PE5 E130308A19Rik-202ENSMUST00000070150 10856 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Smim3Q99PE5 Fn1-203ENSMUST00000186129 7797 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Smim3Q99PE5 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Smim3Q99PE5 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC9.93□□□□□ -0.82
Smim3Q99PE5 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Smim3Q99PE5 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC9.93□□□□□ -0.82
Smim3Q99PE5 Slc45a1-202ENSMUST00000117997 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Smim3Q99PE5 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC9.93□□□□□ -0.82
Smim3Q99PE5 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Smim3Q99PE5 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC9.92□□□□□ -0.82
Smim3Q99PE5 Gfra2-201ENSMUST00000022699 3472 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Smim3Q99PE5 Gmip-202ENSMUST00000123453 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Smim3Q99PE5 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Smim3Q99PE5 Gm44369-201ENSMUST00000204543 2175 ntBASIC9.92□□□□□ -0.82
Smim3Q99PE5 Mtmr11-201ENSMUST00000054356 2778 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Smim3Q99PE5 Gm38089-201ENSMUST00000193585 1514 ntBASIC9.92□□□□□ -0.82
Smim3Q99PE5 AC124433.1-202ENSMUST00000224762 1535 ntBASIC9.92□□□□□ -0.82
Smim3Q99PE5 Plpbp-203ENSMUST00000209525 5767 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Smim3Q99PE5 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Smim3Q99PE5 Nup210-202ENSMUST00000113509 6893 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Smim3Q99PE5 Nrap-204ENSMUST00000166203 5079 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Smim3Q99PE5 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Smim3Q99PE5 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms