Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trex1Q91XB0 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Trex1Q91XB0 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trex1Q91XB0 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trex1Q91XB0 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trex1Q91XB0 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Trex1Q91XB0 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trex1Q91XB0 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
Trex1Q91XB0 Gm14395-201ENSMUST00000120494 563 ntBASIC13.4□□□□□ -0.26
Trex1Q91XB0 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC13.4□□□□□ -0.26
Trex1Q91XB0 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trex1Q91XB0 Gm38314-201ENSMUST00000195709 625 ntBASIC13.4□□□□□ -0.26
Trex1Q91XB0 D3Ertd751e-215ENSMUST00000195882 680 ntAPPRIS P3 TSL 2 BASIC13.4□□□□□ -0.26
Trex1Q91XB0 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC13.4□□□□□ -0.26
Trex1Q91XB0 Gm45120-201ENSMUST00000208880 408 ntBASIC13.4□□□□□ -0.26
Trex1Q91XB0 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC13.4□□□□□ -0.26
Trex1Q91XB0 Lgi3-203ENSMUST00000226548 1001 ntBASIC13.4□□□□□ -0.26
Trex1Q91XB0 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trex1Q91XB0 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trex1Q91XB0 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trex1Q91XB0 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trex1Q91XB0 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trex1Q91XB0 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trex1Q91XB0 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trex1Q91XB0 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC13.4□□□□□ -0.26
Trex1Q91XB0 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
Trex1Q91XB0 Gm27194-201ENSMUST00000175753 2936 ntBASIC13.4□□□□□ -0.27
Trex1Q91XB0 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trex1Q91XB0 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Trex1Q91XB0 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Trex1Q91XB0 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trex1Q91XB0 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trex1Q91XB0 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Trex1Q91XB0 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
Trex1Q91XB0 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Trex1Q91XB0 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trex1Q91XB0 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trex1Q91XB0 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Trex1Q91XB0 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Trex1Q91XB0 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trex1Q91XB0 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC13.39□□□□□ -0.27
Trex1Q91XB0 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Trex1Q91XB0 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trex1Q91XB0 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Trex1Q91XB0 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC13.39□□□□□ -0.27
Trex1Q91XB0 Gm14892-201ENSMUST00000117636 267 ntBASIC13.39□□□□□ -0.27
Trex1Q91XB0 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Trex1Q91XB0 Gm12030-201ENSMUST00000121917 223 ntBASIC13.39□□□□□ -0.27
Trex1Q91XB0 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC13.39□□□□□ -0.27
Trex1Q91XB0 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trex1Q91XB0 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC13.39□□□□□ -0.27
Trex1Q91XB0 Gm7593-201ENSMUST00000187246 644 ntBASIC13.39□□□□□ -0.27
Trex1Q91XB0 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC13.39□□□□□ -0.27
Trex1Q91XB0 Gm45410-201ENSMUST00000211331 1093 ntBASIC13.39□□□□□ -0.27
Trex1Q91XB0 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
Trex1Q91XB0 Gm19046-201ENSMUST00000221263 1298 ntBASIC13.39□□□□□ -0.27
Trex1Q91XB0 CT030170.2-201ENSMUST00000223267 126 ntBASIC13.39□□□□□ -0.27
Trex1Q91XB0 AC154184.3-201ENSMUST00000225620 1090 ntBASIC13.39□□□□□ -0.27
Trex1Q91XB0 Gm5468-202ENSMUST00000227851 682 ntBASIC13.39□□□□□ -0.27
Trex1Q91XB0 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Trex1Q91XB0 Gm10263-201ENSMUST00000085163 300 ntBASIC13.39□□□□□ -0.27
Trex1Q91XB0 Sparc-207ENSMUST00000213866 1366 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Trex1Q91XB0 A530032D15Rik-201ENSMUST00000160792 1492 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trex1Q91XB0 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC13.39□□□□□ -0.27
Trex1Q91XB0 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC13.39□□□□□ -0.27
Trex1Q91XB0 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trex1Q91XB0 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trex1Q91XB0 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trex1Q91XB0 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trex1Q91XB0 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC13.39□□□□□ -0.27
Trex1Q91XB0 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trex1Q91XB0 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trex1Q91XB0 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Trex1Q91XB0 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trex1Q91XB0 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trex1Q91XB0 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trex1Q91XB0 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trex1Q91XB0 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trex1Q91XB0 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trex1Q91XB0 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trex1Q91XB0 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Trex1Q91XB0 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trex1Q91XB0 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Trex1Q91XB0 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trex1Q91XB0 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trex1Q91XB0 Ntrk2-204ENSMUST00000224259 3049 ntBASIC13.38□□□□□ -0.27
Trex1Q91XB0 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC13.38□□□□□ -0.27
Trex1Q91XB0 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trex1Q91XB0 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Trex1Q91XB0 CT009757.3-201ENSMUST00000223367 2320 ntBASIC13.38□□□□□ -0.27
Trex1Q91XB0 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trex1Q91XB0 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Trex1Q91XB0 Gm4294-201ENSMUST00000105169 614 ntBASIC13.38□□□□□ -0.27
Trex1Q91XB0 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Trex1Q91XB0 Gm12990-201ENSMUST00000120372 468 ntBASIC13.38□□□□□ -0.27
Trex1Q91XB0 Gm13117-201ENSMUST00000120894 691 ntBASIC13.38□□□□□ -0.27
Trex1Q91XB0 Gm25492-201ENSMUST00000157383 129 ntBASIC13.38□□□□□ -0.27
Trex1Q91XB0 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC13.38□□□□□ -0.27
Trex1Q91XB0 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC13.38□□□□□ -0.27
Trex1Q91XB0 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC13.38□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms