Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Fam26e-201ENSMUST00000069125 5323 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Vps39Q8R5L3 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Vps39Q8R5L3 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Vps39Q8R5L3 Jade1-201ENSMUST00000026865 5481 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Vps39Q8R5L3 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Vps39Q8R5L3 Tgoln1-201ENSMUST00000070524 5013 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Vps39Q8R5L3 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Vps39Q8R5L3 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Vps39Q8R5L3 Gm43807-201ENSMUST00000200678 1781 ntBASIC11.74□□□□□ -0.53
Vps39Q8R5L3 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Vps39Q8R5L3 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC11.74□□□□□ -0.53
Vps39Q8R5L3 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC11.74□□□□□ -0.53
Vps39Q8R5L3 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Vps39Q8R5L3 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Vps39Q8R5L3 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Vps39Q8R5L3 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Vps39Q8R5L3 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Vps39Q8R5L3 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Vps39Q8R5L3 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Vps39Q8R5L3 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
Vps39Q8R5L3 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Vps39Q8R5L3 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Vps39Q8R5L3 Gm15276-201ENSMUST00000145953 498 ntBASIC11.74□□□□□ -0.53
Vps39Q8R5L3 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Vps39Q8R5L3 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Vps39Q8R5L3 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC11.74□□□□□ -0.53
Vps39Q8R5L3 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Vps39Q8R5L3 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Vps39Q8R5L3 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Vps39Q8R5L3 Gm7895-201ENSMUST00000187459 1173 ntBASIC11.74□□□□□ -0.53
Vps39Q8R5L3 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Vps39Q8R5L3 Ighv4-2-201ENSMUST00000192975 362 ntBASIC11.74□□□□□ -0.53
Vps39Q8R5L3 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC11.74□□□□□ -0.53
Vps39Q8R5L3 Gm13097-201ENSMUST00000210722 397 ntBASIC11.74□□□□□ -0.53
Vps39Q8R5L3 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Vps39Q8R5L3 Gm8420-201ENSMUST00000097103 598 ntBASIC11.74□□□□□ -0.53
Vps39Q8R5L3 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC11.74□□□□□ -0.53
Vps39Q8R5L3 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Vps39Q8R5L3 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Vps39Q8R5L3 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Vps39Q8R5L3 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Vps39Q8R5L3 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Vps39Q8R5L3 Gm45495-201ENSMUST00000200940 1700 ntBASIC11.74□□□□□ -0.53
Vps39Q8R5L3 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Vps39Q8R5L3 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Vps39Q8R5L3 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Vps39Q8R5L3 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Vps39Q8R5L3 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Vps39Q8R5L3 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Vps39Q8R5L3 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Vps39Q8R5L3 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Vps39Q8R5L3 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Vps39Q8R5L3 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Vps39Q8R5L3 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Vps39Q8R5L3 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC11.73□□□□□ -0.53
Vps39Q8R5L3 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Vps39Q8R5L3 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Vps39Q8R5L3 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Vps39Q8R5L3 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Vps39Q8R5L3 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Vps39Q8R5L3 Gm22133-201ENSMUST00000102082 109 ntBASIC11.73□□□□□ -0.53
Vps39Q8R5L3 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Vps39Q8R5L3 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Vps39Q8R5L3 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC11.73□□□□□ -0.53
Vps39Q8R5L3 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Vps39Q8R5L3 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC11.73□□□□□ -0.53
Vps39Q8R5L3 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Vps39Q8R5L3 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Vps39Q8R5L3 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC11.73□□□□□ -0.53
Vps39Q8R5L3 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Vps39Q8R5L3 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Vps39Q8R5L3 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Vps39Q8R5L3 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Vps39Q8R5L3 Gm20482-202ENSMUST00000174729 825 ntBASIC11.73□□□□□ -0.53
Vps39Q8R5L3 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Vps39Q8R5L3 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Vps39Q8R5L3 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Vps39Q8R5L3 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Vps39Q8R5L3 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Vps39Q8R5L3 Gm28719-201ENSMUST00000187779 1757 ntBASIC11.73□□□□□ -0.53
Vps39Q8R5L3 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Vps39Q8R5L3 Gm38314-201ENSMUST00000195709 625 ntBASIC11.73□□□□□ -0.53
Vps39Q8R5L3 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Vps39Q8R5L3 Gm3961-201ENSMUST00000204425 994 ntBASIC11.73□□□□□ -0.53
Vps39Q8R5L3 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC11.73□□□□□ -0.53
Vps39Q8R5L3 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC11.73□□□□□ -0.53
Vps39Q8R5L3 Olfr1347-205ENSMUST00000220413 964 ntBASIC11.73□□□□□ -0.53
Vps39Q8R5L3 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC11.73□□□□□ -0.53
Vps39Q8R5L3 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Vps39Q8R5L3 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Vps39Q8R5L3 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Vps39Q8R5L3 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Vps39Q8R5L3 Gm5705-201ENSMUST00000066241 711 ntBASIC11.73□□□□□ -0.53
Vps39Q8R5L3 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Vps39Q8R5L3 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Vps39Q8R5L3 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Vps39Q8R5L3 Smarca2-209ENSMUST00000176030 5862 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Vps39Q8R5L3 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Vps39Q8R5L3 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Vps39Q8R5L3 Lrba-202ENSMUST00000192145 8843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms