Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccdc28bQ8CEG5 Ppargc1b-201ENSMUST00000063307 3330 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccdc28bQ8CEG5 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccdc28bQ8CEG5 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccdc28bQ8CEG5 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Ccdc28bQ8CEG5 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC11.61□□□□□ -0.55
Ccdc28bQ8CEG5 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC11.61□□□□□ -0.55
Ccdc28bQ8CEG5 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC11.61□□□□□ -0.55
Ccdc28bQ8CEG5 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC11.61□□□□□ -0.55
Ccdc28bQ8CEG5 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Ccdc28bQ8CEG5 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC11.61□□□□□ -0.55
Ccdc28bQ8CEG5 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Ccdc28bQ8CEG5 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC11.61□□□□□ -0.55
Ccdc28bQ8CEG5 Gm44755-201ENSMUST00000207830 2102 ntBASIC11.61□□□□□ -0.55
Ccdc28bQ8CEG5 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccdc28bQ8CEG5 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC11.61□□□□□ -0.55
Ccdc28bQ8CEG5 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccdc28bQ8CEG5 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC11.61□□□□□ -0.55
Ccdc28bQ8CEG5 AC158982.1-201ENSMUST00000228377 901 ntBASIC11.61□□□□□ -0.55
Ccdc28bQ8CEG5 Itgb2-201ENSMUST00000000299 2970 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccdc28bQ8CEG5 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Ccdc28bQ8CEG5 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccdc28bQ8CEG5 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccdc28bQ8CEG5 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Ccdc28bQ8CEG5 Sorbs3-203ENSMUST00000227653 3061 ntAPPRIS ALT2 BASIC11.61□□□□□ -0.55
Ccdc28bQ8CEG5 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Ccdc28bQ8CEG5 Scamp2-201ENSMUST00000045791 2340 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccdc28bQ8CEG5 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccdc28bQ8CEG5 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccdc28bQ8CEG5 Gm28268-201ENSMUST00000188966 2528 ntTSL 5 BASIC11.61□□□□□ -0.55
Ccdc28bQ8CEG5 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Ccdc28bQ8CEG5 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccdc28bQ8CEG5 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Ccdc28bQ8CEG5 AC123738.2-201ENSMUST00000223791 1899 ntBASIC11.61□□□□□ -0.55
Ccdc28bQ8CEG5 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccdc28bQ8CEG5 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Ccdc28bQ8CEG5 Gm45161-201ENSMUST00000207316 2263 ntBASIC11.61□□□□□ -0.55
Ccdc28bQ8CEG5 Csnk1g1-214ENSMUST00000206594 2482 ntAPPRIS P2 TSL 5 BASIC11.61□□□□□ -0.55
Ccdc28bQ8CEG5 Gm35507-201ENSMUST00000197932 2761 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Ccdc28bQ8CEG5 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccdc28bQ8CEG5 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC11.61□□□□□ -0.55
Ccdc28bQ8CEG5 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccdc28bQ8CEG5 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ccdc28bQ8CEG5 CT868720.1-201ENSMUST00000223069 2544 ntBASIC11.6□□□□□ -0.55
Ccdc28bQ8CEG5 Stx1b-201ENSMUST00000106267 4536 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ccdc28bQ8CEG5 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ccdc28bQ8CEG5 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ccdc28bQ8CEG5 Plekhg4-206ENSMUST00000214056 3654 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Ccdc28bQ8CEG5 Ap4m1-201ENSMUST00000019662 3479 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ccdc28bQ8CEG5 Themis2-201ENSMUST00000045154 3079 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ccdc28bQ8CEG5 Zfp384-204ENSMUST00000088308 2875 ntAPPRIS P2 TSL 5 BASIC11.6□□□□□ -0.55
Ccdc28bQ8CEG5 Glb1l2-207ENSMUST00000162702 2555 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Ccdc28bQ8CEG5 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Ccdc28bQ8CEG5 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC11.6□□□□□ -0.55
Ccdc28bQ8CEG5 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC11.6□□□□□ -0.55
Ccdc28bQ8CEG5 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ccdc28bQ8CEG5 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Ccdc28bQ8CEG5 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Ccdc28bQ8CEG5 Gm8908-201ENSMUST00000121633 1024 ntBASIC11.6□□□□□ -0.55
Ccdc28bQ8CEG5 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC11.6□□□□□ -0.55
Ccdc28bQ8CEG5 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC11.6□□□□□ -0.55
Ccdc28bQ8CEG5 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ccdc28bQ8CEG5 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ccdc28bQ8CEG5 Gm24548-201ENSMUST00000158650 108 ntBASIC11.6□□□□□ -0.55
Ccdc28bQ8CEG5 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC11.6□□□□□ -0.55
Ccdc28bQ8CEG5 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC11.6□□□□□ -0.55
Ccdc28bQ8CEG5 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Ccdc28bQ8CEG5 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC11.6□□□□□ -0.55
Ccdc28bQ8CEG5 Gm6222-202ENSMUST00000182143 629 ntBASIC11.6□□□□□ -0.55
Ccdc28bQ8CEG5 Gm27839-201ENSMUST00000184242 106 ntBASIC11.6□□□□□ -0.55
Ccdc28bQ8CEG5 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC11.6□□□□□ -0.55
Ccdc28bQ8CEG5 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Ccdc28bQ8CEG5 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ccdc28bQ8CEG5 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ccdc28bQ8CEG5 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC11.6□□□□□ -0.55
Ccdc28bQ8CEG5 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ccdc28bQ8CEG5 Sod3-201ENSMUST00000101208 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ccdc28bQ8CEG5 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ccdc28bQ8CEG5 Unc5cl-201ENSMUST00000074574 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ccdc28bQ8CEG5 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ccdc28bQ8CEG5 Ces3b-202ENSMUST00000093221 2403 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ccdc28bQ8CEG5 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ccdc28bQ8CEG5 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ccdc28bQ8CEG5 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Ccdc28bQ8CEG5 Slco5a1-201ENSMUST00000115402 3690 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Ccdc28bQ8CEG5 Zfp280d-211ENSMUST00000184036 3459 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Ccdc28bQ8CEG5 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Ccdc28bQ8CEG5 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ccdc28bQ8CEG5 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC11.6□□□□□ -0.55
Ccdc28bQ8CEG5 Odf2l-202ENSMUST00000098538 2564 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Ccdc28bQ8CEG5 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ccdc28bQ8CEG5 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ccdc28bQ8CEG5 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ccdc28bQ8CEG5 Apobec3-205ENSMUST00000175752 1977 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ccdc28bQ8CEG5 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ccdc28bQ8CEG5 Pld5-203ENSMUST00000111167 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ccdc28bQ8CEG5 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ccdc28bQ8CEG5 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ccdc28bQ8CEG5 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Ccdc28bQ8CEG5 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms