Protein–RNA interactions for Protein: Q8CDW1

Fam228a, Protein FAM228A, mousemouse

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam228aQ8CDW1 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Fam228aQ8CDW1 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Fam228aQ8CDW1 Gm5847-201ENSMUST00000178959 1595 ntBASIC12.29□□□□□ -0.44
Fam228aQ8CDW1 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Fam228aQ8CDW1 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Fam228aQ8CDW1 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Fam228aQ8CDW1 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Fam228aQ8CDW1 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC12.29□□□□□ -0.44
Fam228aQ8CDW1 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Fam228aQ8CDW1 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Fam228aQ8CDW1 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Fam228aQ8CDW1 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Fam228aQ8CDW1 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Fam228aQ8CDW1 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Fam228aQ8CDW1 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC12.28□□□□□ -0.44
Fam228aQ8CDW1 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Fam228aQ8CDW1 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Fam228aQ8CDW1 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Fam228aQ8CDW1 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Fam228aQ8CDW1 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Fam228aQ8CDW1 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Fam228aQ8CDW1 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Fam228aQ8CDW1 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Fam228aQ8CDW1 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC12.28□□□□□ -0.44
Fam228aQ8CDW1 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Fam228aQ8CDW1 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC12.28□□□□□ -0.44
Fam228aQ8CDW1 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Fam228aQ8CDW1 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Fam228aQ8CDW1 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Fam228aQ8CDW1 Gm5950-201ENSMUST00000213337 772 ntBASIC12.28□□□□□ -0.44
Fam228aQ8CDW1 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC12.28□□□□□ -0.44
Fam228aQ8CDW1 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Fam228aQ8CDW1 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Fam228aQ8CDW1 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Fam228aQ8CDW1 AC154537.1-201ENSMUST00000226101 1304 ntBASIC12.28□□□□□ -0.44
Fam228aQ8CDW1 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Fam228aQ8CDW1 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Fam228aQ8CDW1 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Fam228aQ8CDW1 Emc1-201ENSMUST00000042096 4706 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Fam228aQ8CDW1 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Fam228aQ8CDW1 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Fam228aQ8CDW1 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Fam228aQ8CDW1 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Fam228aQ8CDW1 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC12.28□□□□□ -0.44
Fam228aQ8CDW1 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC12.28□□□□□ -0.44
Fam228aQ8CDW1 Poc5-201ENSMUST00000099295 5183 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Fam228aQ8CDW1 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Fam228aQ8CDW1 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Fam228aQ8CDW1 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC12.27□□□□□ -0.44
Fam228aQ8CDW1 Gm43522-201ENSMUST00000196697 1922 ntBASIC12.27□□□□□ -0.44
Fam228aQ8CDW1 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Fam228aQ8CDW1 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Fam228aQ8CDW1 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Fam228aQ8CDW1 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Fam228aQ8CDW1 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Fam228aQ8CDW1 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Fam228aQ8CDW1 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Fam228aQ8CDW1 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC12.27□□□□□ -0.44
Fam228aQ8CDW1 AC165351.1-201ENSMUST00000219078 2020 ntBASIC12.27□□□□□ -0.44
Fam228aQ8CDW1 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Fam228aQ8CDW1 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC12.27□□□□□ -0.45
Fam228aQ8CDW1 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Fam228aQ8CDW1 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Fam228aQ8CDW1 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Fam228aQ8CDW1 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Fam228aQ8CDW1 Gm12329-201ENSMUST00000120829 1007 ntBASIC12.27□□□□□ -0.45
Fam228aQ8CDW1 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Fam228aQ8CDW1 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC12.27□□□□□ -0.45
Fam228aQ8CDW1 Gm17150-201ENSMUST00000165577 381 ntBASIC12.27□□□□□ -0.45
Fam228aQ8CDW1 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC12.27□□□□□ -0.45
Fam228aQ8CDW1 Gm43118-201ENSMUST00000199149 775 ntBASIC12.27□□□□□ -0.45
Fam228aQ8CDW1 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Fam228aQ8CDW1 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC12.27□□□□□ -0.45
Fam228aQ8CDW1 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Fam228aQ8CDW1 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Fam228aQ8CDW1 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
Fam228aQ8CDW1 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Fam228aQ8CDW1 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Fam228aQ8CDW1 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Fam228aQ8CDW1 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC12.27□□□□□ -0.45
Fam228aQ8CDW1 Myo7a-201ENSMUST00000084979 6849 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Fam228aQ8CDW1 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.45
Fam228aQ8CDW1 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Fam228aQ8CDW1 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Fam228aQ8CDW1 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Fam228aQ8CDW1 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC12.26□□□□□ -0.45
Fam228aQ8CDW1 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Fam228aQ8CDW1 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Fam228aQ8CDW1 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Fam228aQ8CDW1 AC167669.2-201ENSMUST00000224417 1620 ntBASIC12.26□□□□□ -0.45
Fam228aQ8CDW1 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Fam228aQ8CDW1 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Fam228aQ8CDW1 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Fam228aQ8CDW1 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Fam228aQ8CDW1 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC12.26□□□□□ -0.45
Fam228aQ8CDW1 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Fam228aQ8CDW1 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
Fam228aQ8CDW1 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Fam228aQ8CDW1 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC12.26□□□□□ -0.45
Fam228aQ8CDW1 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms