Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Usp44Q8C2S0 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Usp44Q8C2S0 Gm6108-201ENSMUST00000208365 367 ntBASIC13.7□□□□□ -0.22
Usp44Q8C2S0 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Usp44Q8C2S0 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Usp44Q8C2S0 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Usp44Q8C2S0 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Usp44Q8C2S0 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC13.7□□□□□ -0.22
Usp44Q8C2S0 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Usp44Q8C2S0 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Usp44Q8C2S0 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Usp44Q8C2S0 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Usp44Q8C2S0 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Usp44Q8C2S0 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Usp44Q8C2S0 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Usp44Q8C2S0 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Usp44Q8C2S0 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Usp44Q8C2S0 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Usp44Q8C2S0 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Usp44Q8C2S0 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Usp44Q8C2S0 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Usp44Q8C2S0 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Usp44Q8C2S0 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Usp44Q8C2S0 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
Usp44Q8C2S0 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Usp44Q8C2S0 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Usp44Q8C2S0 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Usp44Q8C2S0 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC13.69□□□□□ -0.22
Usp44Q8C2S0 Gm7150-201ENSMUST00000122032 981 ntBASIC13.69□□□□□ -0.22
Usp44Q8C2S0 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Usp44Q8C2S0 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC13.69□□□□□ -0.22
Usp44Q8C2S0 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Usp44Q8C2S0 Gm26047-201ENSMUST00000157308 113 ntBASIC13.69□□□□□ -0.22
Usp44Q8C2S0 Gm24844-201ENSMUST00000158679 127 ntBASIC13.69□□□□□ -0.22
Usp44Q8C2S0 Gm3150-201ENSMUST00000166418 204 ntBASIC13.69□□□□□ -0.22
Usp44Q8C2S0 Gm6548-201ENSMUST00000167498 1165 ntBASIC13.69□□□□□ -0.22
Usp44Q8C2S0 Mir7070-201ENSMUST00000183657 86 ntBASIC13.69□□□□□ -0.22
Usp44Q8C2S0 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC13.69□□□□□ -0.22
Usp44Q8C2S0 Gm37466-201ENSMUST00000195692 652 ntBASIC13.69□□□□□ -0.22
Usp44Q8C2S0 Gm26047-202ENSMUST00000198840 115 ntBASIC13.69□□□□□ -0.22
Usp44Q8C2S0 Gm45909-201ENSMUST00000212413 1031 ntBASIC13.69□□□□□ -0.22
Usp44Q8C2S0 AC166344.1-201ENSMUST00000223745 674 ntBASIC13.69□□□□□ -0.22
Usp44Q8C2S0 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Usp44Q8C2S0 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Usp44Q8C2S0 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Usp44Q8C2S0 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
Usp44Q8C2S0 Gm14150-201ENSMUST00000122404 1354 ntBASIC13.69□□□□□ -0.22
Usp44Q8C2S0 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Usp44Q8C2S0 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Usp44Q8C2S0 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC13.69□□□□□ -0.22
Usp44Q8C2S0 Gm10728-201ENSMUST00000194292 1829 ntBASIC13.69□□□□□ -0.22
Usp44Q8C2S0 Gm42829-201ENSMUST00000198417 2585 ntBASIC13.69□□□□□ -0.22
Usp44Q8C2S0 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC13.69□□□□□ -0.22
Usp44Q8C2S0 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Usp44Q8C2S0 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Usp44Q8C2S0 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Usp44Q8C2S0 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC13.68□□□□□ -0.22
Usp44Q8C2S0 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Usp44Q8C2S0 AC154537.1-201ENSMUST00000226101 1304 ntBASIC13.68□□□□□ -0.22
Usp44Q8C2S0 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Usp44Q8C2S0 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Usp44Q8C2S0 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Usp44Q8C2S0 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC13.68□□□□□ -0.22
Usp44Q8C2S0 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Usp44Q8C2S0 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Usp44Q8C2S0 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Usp44Q8C2S0 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC13.68□□□□□ -0.22
Usp44Q8C2S0 Gm3329-201ENSMUST00000159873 556 ntBASIC13.68□□□□□ -0.22
Usp44Q8C2S0 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Usp44Q8C2S0 Gm29499-201ENSMUST00000189151 486 ntBASIC13.68□□□□□ -0.22
Usp44Q8C2S0 Gm28329-201ENSMUST00000191208 689 ntBASIC13.68□□□□□ -0.22
Usp44Q8C2S0 Gm29171-201ENSMUST00000191397 486 ntBASIC13.68□□□□□ -0.22
Usp44Q8C2S0 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Usp44Q8C2S0 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC13.68□□□□□ -0.22
Usp44Q8C2S0 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Usp44Q8C2S0 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Usp44Q8C2S0 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Usp44Q8C2S0 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC13.68□□□□□ -0.22
Usp44Q8C2S0 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Usp44Q8C2S0 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Usp44Q8C2S0 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Usp44Q8C2S0 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Usp44Q8C2S0 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Usp44Q8C2S0 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Usp44Q8C2S0 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Usp44Q8C2S0 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Usp44Q8C2S0 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Usp44Q8C2S0 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Usp44Q8C2S0 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Usp44Q8C2S0 AC122811.1-201ENSMUST00000222257 2921 ntBASIC13.67□□□□□ -0.22
Usp44Q8C2S0 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Usp44Q8C2S0 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC13.67□□□□□ -0.22
Usp44Q8C2S0 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Usp44Q8C2S0 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Usp44Q8C2S0 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Usp44Q8C2S0 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC13.67□□□□□ -0.22
Usp44Q8C2S0 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Usp44Q8C2S0 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
Usp44Q8C2S0 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Usp44Q8C2S0 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms