Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Cpsf4Q8BQZ5 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Cpsf4Q8BQZ5 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cpsf4Q8BQZ5 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Cpsf4Q8BQZ5 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cpsf4Q8BQZ5 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Cpsf4Q8BQZ5 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Cpsf4Q8BQZ5 Gm44152-201ENSMUST00000205007 1691 ntBASIC11.39□□□□□ -0.59
Cpsf4Q8BQZ5 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC11.39□□□□□ -0.59
Cpsf4Q8BQZ5 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cpsf4Q8BQZ5 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC11.39□□□□□ -0.59
Cpsf4Q8BQZ5 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cpsf4Q8BQZ5 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cpsf4Q8BQZ5 Triobp-204ENSMUST00000109690 7023 ntAPPRIS P4 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cpsf4Q8BQZ5 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Cpsf4Q8BQZ5 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cpsf4Q8BQZ5 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Cpsf4Q8BQZ5 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cpsf4Q8BQZ5 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cpsf4Q8BQZ5 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Cpsf4Q8BQZ5 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cpsf4Q8BQZ5 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cpsf4Q8BQZ5 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cpsf4Q8BQZ5 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Cpsf4Q8BQZ5 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cpsf4Q8BQZ5 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Cpsf4Q8BQZ5 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cpsf4Q8BQZ5 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cpsf4Q8BQZ5 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC11.38□□□□□ -0.59
Cpsf4Q8BQZ5 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Cpsf4Q8BQZ5 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cpsf4Q8BQZ5 Zfp608-201ENSMUST00000064763 6112 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cpsf4Q8BQZ5 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cpsf4Q8BQZ5 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Cpsf4Q8BQZ5 CU062626.3-201ENSMUST00000225522 1411 ntBASIC11.38□□□□□ -0.59
Cpsf4Q8BQZ5 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cpsf4Q8BQZ5 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC11.38□□□□□ -0.59
Cpsf4Q8BQZ5 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cpsf4Q8BQZ5 Mir7070-201ENSMUST00000183657 86 ntBASIC11.38□□□□□ -0.59
Cpsf4Q8BQZ5 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC11.38□□□□□ -0.59
Cpsf4Q8BQZ5 Gm44711-201ENSMUST00000205414 1264 ntBASIC11.38□□□□□ -0.59
Cpsf4Q8BQZ5 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cpsf4Q8BQZ5 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC11.38□□□□□ -0.59
Cpsf4Q8BQZ5 Gm21027-201ENSMUST00000219300 1236 ntBASIC11.38□□□□□ -0.59
Cpsf4Q8BQZ5 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cpsf4Q8BQZ5 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cpsf4Q8BQZ5 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cpsf4Q8BQZ5 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC11.38□□□□□ -0.59
Cpsf4Q8BQZ5 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cpsf4Q8BQZ5 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cpsf4Q8BQZ5 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Cpsf4Q8BQZ5 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cpsf4Q8BQZ5 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Cpsf4Q8BQZ5 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cpsf4Q8BQZ5 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cpsf4Q8BQZ5 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cpsf4Q8BQZ5 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Cpsf4Q8BQZ5 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC11.38□□□□□ -0.59
Cpsf4Q8BQZ5 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Cpsf4Q8BQZ5 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Cpsf4Q8BQZ5 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cpsf4Q8BQZ5 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC11.37□□□□□ -0.59
Cpsf4Q8BQZ5 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Cpsf4Q8BQZ5 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Cpsf4Q8BQZ5 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Cpsf4Q8BQZ5 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cpsf4Q8BQZ5 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC11.37□□□□□ -0.59
Cpsf4Q8BQZ5 AC123619.2-202ENSMUST00000225097 1568 ntBASIC11.37□□□□□ -0.59
Cpsf4Q8BQZ5 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cpsf4Q8BQZ5 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Cpsf4Q8BQZ5 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC11.37□□□□□ -0.59
Cpsf4Q8BQZ5 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cpsf4Q8BQZ5 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cpsf4Q8BQZ5 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cpsf4Q8BQZ5 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cpsf4Q8BQZ5 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Cpsf4Q8BQZ5 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Cpsf4Q8BQZ5 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cpsf4Q8BQZ5 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cpsf4Q8BQZ5 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Cpsf4Q8BQZ5 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Cpsf4Q8BQZ5 Gm23200-201ENSMUST00000104379 132 ntBASIC11.37□□□□□ -0.59
Cpsf4Q8BQZ5 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC11.37□□□□□ -0.59
Cpsf4Q8BQZ5 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC11.37□□□□□ -0.59
Cpsf4Q8BQZ5 Gm7722-201ENSMUST00000120646 741 ntBASIC11.37□□□□□ -0.59
Cpsf4Q8BQZ5 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Cpsf4Q8BQZ5 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Cpsf4Q8BQZ5 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC11.37□□□□□ -0.59
Cpsf4Q8BQZ5 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
Cpsf4Q8BQZ5 Gm18827-201ENSMUST00000188341 790 ntBASIC11.37□□□□□ -0.59
Cpsf4Q8BQZ5 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Cpsf4Q8BQZ5 Gm18636-201ENSMUST00000218846 1066 ntBASIC11.37□□□□□ -0.59
Cpsf4Q8BQZ5 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cpsf4Q8BQZ5 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cpsf4Q8BQZ5 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cpsf4Q8BQZ5 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cpsf4Q8BQZ5 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Cpsf4Q8BQZ5 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cpsf4Q8BQZ5 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Cpsf4Q8BQZ5 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms