Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Gm45865-201ENSMUST00000211815 945 ntBASIC12.32□□□□□ -0.44
Ccdc40Q8BI79 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Ccdc40Q8BI79 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Ccdc40Q8BI79 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc40Q8BI79 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Ccdc40Q8BI79 Gm6189-201ENSMUST00000164487 2082 ntBASIC12.32□□□□□ -0.44
Ccdc40Q8BI79 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
Ccdc40Q8BI79 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc40Q8BI79 Mageb4-202ENSMUST00000113969 2403 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc40Q8BI79 Mageb4-201ENSMUST00000096378 2401 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc40Q8BI79 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc40Q8BI79 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc40Q8BI79 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc40Q8BI79 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc40Q8BI79 Myo15b-201ENSMUST00000040703 2825 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc40Q8BI79 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc40Q8BI79 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Ccdc40Q8BI79 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc40Q8BI79 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc40Q8BI79 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC12.31□□□□□ -0.44
Ccdc40Q8BI79 Tmcc2-201ENSMUST00000045473 3410 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc40Q8BI79 Gm8522-201ENSMUST00000118416 1929 ntBASIC12.31□□□□□ -0.44
Ccdc40Q8BI79 Gm37131-201ENSMUST00000192502 1561 ntBASIC12.31□□□□□ -0.44
Ccdc40Q8BI79 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc40Q8BI79 Ppargc1b-201ENSMUST00000063307 3330 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc40Q8BI79 Cd276-201ENSMUST00000039788 3186 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc40Q8BI79 Calhm2-201ENSMUST00000035822 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc40Q8BI79 Gm21103-202ENSMUST00000170923 1761 ntAPPRIS P5 TSL 5 BASIC12.31□□□□□ -0.44
Ccdc40Q8BI79 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc40Q8BI79 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Ccdc40Q8BI79 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc40Q8BI79 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc40Q8BI79 Gm11989-201ENSMUST00000117240 672 ntBASIC12.31□□□□□ -0.44
Ccdc40Q8BI79 Gm11362-201ENSMUST00000118838 850 ntBASIC12.31□□□□□ -0.44
Ccdc40Q8BI79 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC12.31□□□□□ -0.44
Ccdc40Q8BI79 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC12.31□□□□□ -0.44
Ccdc40Q8BI79 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc40Q8BI79 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC12.31□□□□□ -0.44
Ccdc40Q8BI79 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC12.31□□□□□ -0.44
Ccdc40Q8BI79 Gm8885-201ENSMUST00000189382 598 ntBASIC12.31□□□□□ -0.44
Ccdc40Q8BI79 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC12.31□□□□□ -0.44
Ccdc40Q8BI79 Gm38241-201ENSMUST00000192641 898 ntBASIC12.31□□□□□ -0.44
Ccdc40Q8BI79 Gm44364-201ENSMUST00000198368 141 ntBASIC12.31□□□□□ -0.44
Ccdc40Q8BI79 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc40Q8BI79 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC12.31□□□□□ -0.44
Ccdc40Q8BI79 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc40Q8BI79 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC12.31□□□□□ -0.44
Ccdc40Q8BI79 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc40Q8BI79 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Ccdc40Q8BI79 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc40Q8BI79 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc40Q8BI79 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc40Q8BI79 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc40Q8BI79 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc40Q8BI79 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Ccdc40Q8BI79 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc40Q8BI79 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc40Q8BI79 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc40Q8BI79 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc40Q8BI79 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC12.31□□□□□ -0.44
Ccdc40Q8BI79 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc40Q8BI79 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc40Q8BI79 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc40Q8BI79 Eya1-209ENSMUST00000190337 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc40Q8BI79 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC12.3□□□□□ -0.44
Ccdc40Q8BI79 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc40Q8BI79 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc40Q8BI79 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc40Q8BI79 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc40Q8BI79 Gm26868-201ENSMUST00000181927 2655 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc40Q8BI79 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc40Q8BI79 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC12.3□□□□□ -0.44
Ccdc40Q8BI79 Med19-201ENSMUST00000102645 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc40Q8BI79 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc40Q8BI79 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc40Q8BI79 Zfp617-201ENSMUST00000119003 2920 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc40Q8BI79 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc40Q8BI79 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC12.3□□□□□ -0.44
Ccdc40Q8BI79 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC12.3□□□□□ -0.44
Ccdc40Q8BI79 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc40Q8BI79 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc40Q8BI79 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc40Q8BI79 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc40Q8BI79 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Ccdc40Q8BI79 Hmbox1-205ENSMUST00000176128 2958 ntAPPRIS ALT1 TSL 5 BASIC12.3□□□□□ -0.44
Ccdc40Q8BI79 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC12.3□□□□□ -0.44
Ccdc40Q8BI79 Gm17931-201ENSMUST00000208132 634 ntBASIC12.3□□□□□ -0.44
Ccdc40Q8BI79 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc40Q8BI79 AC122371.3-201ENSMUST00000223402 1061 ntBASIC12.3□□□□□ -0.44
Ccdc40Q8BI79 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc40Q8BI79 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc40Q8BI79 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc40Q8BI79 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc40Q8BI79 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc40Q8BI79 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Ccdc40Q8BI79 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc40Q8BI79 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc40Q8BI79 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Ccdc40Q8BI79 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC12.3□□□□□ -0.44
Ccdc40Q8BI79 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms