Protein–RNA interactions for Protein: Q8BI41

Synb, Syncytin-B, mousemouse

Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynbQ8BI41 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SynbQ8BI41 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SynbQ8BI41 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SynbQ8BI41 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SynbQ8BI41 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
SynbQ8BI41 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SynbQ8BI41 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC11.28□□□□□ -0.6
SynbQ8BI41 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
SynbQ8BI41 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
SynbQ8BI41 Gm24231-201ENSMUST00000104315 133 ntBASIC11.28□□□□□ -0.6
SynbQ8BI41 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC11.28□□□□□ -0.6
SynbQ8BI41 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
SynbQ8BI41 Gm15881-201ENSMUST00000148792 942 ntBASIC11.28□□□□□ -0.6
SynbQ8BI41 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SynbQ8BI41 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC11.28□□□□□ -0.6
SynbQ8BI41 Gm5733-201ENSMUST00000190232 939 ntBASIC11.28□□□□□ -0.6
SynbQ8BI41 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC11.28□□□□□ -0.6
SynbQ8BI41 Gm807-202ENSMUST00000224929 408 ntBASIC11.28□□□□□ -0.6
SynbQ8BI41 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC11.28□□□□□ -0.6
SynbQ8BI41 Mir219a-1-201ENSMUST00000083621 110 ntBASIC11.28□□□□□ -0.6
SynbQ8BI41 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC11.28□□□□□ -0.6
SynbQ8BI41 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
SynbQ8BI41 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC11.28□□□□□ -0.6
SynbQ8BI41 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SynbQ8BI41 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SynbQ8BI41 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SynbQ8BI41 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SynbQ8BI41 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SynbQ8BI41 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC11.28□□□□□ -0.6
SynbQ8BI41 Gm37542-201ENSMUST00000192563 2832 ntBASIC11.28□□□□□ -0.6
SynbQ8BI41 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SynbQ8BI41 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
SynbQ8BI41 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SynbQ8BI41 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SynbQ8BI41 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SynbQ8BI41 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SynbQ8BI41 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SynbQ8BI41 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SynbQ8BI41 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
SynbQ8BI41 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
SynbQ8BI41 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SynbQ8BI41 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SynbQ8BI41 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
SynbQ8BI41 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC11.27□□□□□ -0.6
SynbQ8BI41 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
SynbQ8BI41 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
SynbQ8BI41 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
SynbQ8BI41 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
SynbQ8BI41 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
SynbQ8BI41 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
SynbQ8BI41 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
SynbQ8BI41 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
SynbQ8BI41 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
SynbQ8BI41 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
SynbQ8BI41 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
SynbQ8BI41 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
SynbQ8BI41 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
SynbQ8BI41 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
SynbQ8BI41 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
SynbQ8BI41 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
SynbQ8BI41 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
SynbQ8BI41 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
SynbQ8BI41 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
SynbQ8BI41 Gm14724-201ENSMUST00000118400 537 ntBASIC11.27□□□□□ -0.61
SynbQ8BI41 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC11.27□□□□□ -0.61
SynbQ8BI41 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
SynbQ8BI41 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC11.27□□□□□ -0.61
SynbQ8BI41 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
SynbQ8BI41 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
SynbQ8BI41 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC11.27□□□□□ -0.61
SynbQ8BI41 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
SynbQ8BI41 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC11.27□□□□□ -0.61
SynbQ8BI41 Gm3332-201ENSMUST00000189337 928 ntBASIC11.27□□□□□ -0.61
SynbQ8BI41 Gm37246-201ENSMUST00000192665 835 ntBASIC11.27□□□□□ -0.61
SynbQ8BI41 Gm7600-201ENSMUST00000209657 785 ntBASIC11.27□□□□□ -0.61
SynbQ8BI41 Gm10752-201ENSMUST00000218348 729 ntBASIC11.27□□□□□ -0.61
SynbQ8BI41 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC11.27□□□□□ -0.61
SynbQ8BI41 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC11.27□□□□□ -0.61
SynbQ8BI41 CT009713.8-202ENSMUST00000224732 385 ntBASIC11.27□□□□□ -0.61
SynbQ8BI41 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
SynbQ8BI41 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
SynbQ8BI41 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
SynbQ8BI41 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
SynbQ8BI41 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC11.27□□□□□ -0.61
SynbQ8BI41 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
SynbQ8BI41 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
SynbQ8BI41 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
SynbQ8BI41 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
SynbQ8BI41 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
SynbQ8BI41 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC11.27□□□□□ -0.61
SynbQ8BI41 Btrc-209ENSMUST00000224478 2194 ntBASIC11.27□□□□□ -0.61
SynbQ8BI41 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
SynbQ8BI41 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC11.27□□□□□ -0.61
SynbQ8BI41 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC11.27□□□□□ -0.61
SynbQ8BI41 Gm37580-201ENSMUST00000192408 2800 ntBASIC11.27□□□□□ -0.61
SynbQ8BI41 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
SynbQ8BI41 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
SynbQ8BI41 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
SynbQ8BI41 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
SynbQ8BI41 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 105.2 ms