Protein–RNA interactions for Protein: Q80X53

Ccdc116, Coiled-coil domain-containing protein 116, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc116Q80X53 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ccdc116Q80X53 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Ccdc116Q80X53 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ccdc116Q80X53 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ccdc116Q80X53 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC11.52□□□□□ -0.57
Ccdc116Q80X53 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ccdc116Q80X53 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ccdc116Q80X53 Gm11509-201ENSMUST00000117358 325 ntBASIC11.52□□□□□ -0.57
Ccdc116Q80X53 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Ccdc116Q80X53 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ccdc116Q80X53 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Ccdc116Q80X53 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ccdc116Q80X53 Gm28722-201ENSMUST00000187630 1036 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Ccdc116Q80X53 Gm37666-201ENSMUST00000194110 866 ntBASIC11.52□□□□□ -0.57
Ccdc116Q80X53 Gm21027-201ENSMUST00000219300 1236 ntBASIC11.52□□□□□ -0.57
Ccdc116Q80X53 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ccdc116Q80X53 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ccdc116Q80X53 Gm5705-201ENSMUST00000066241 711 ntBASIC11.52□□□□□ -0.57
Ccdc116Q80X53 Olfr293-201ENSMUST00000081474 1011 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Ccdc116Q80X53 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ccdc116Q80X53 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ccdc116Q80X53 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Ccdc116Q80X53 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ccdc116Q80X53 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Ccdc116Q80X53 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ccdc116Q80X53 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ccdc116Q80X53 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Ccdc116Q80X53 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ccdc116Q80X53 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ccdc116Q80X53 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Ccdc116Q80X53 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ccdc116Q80X53 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC11.52□□□□□ -0.57
Ccdc116Q80X53 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ccdc116Q80X53 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ccdc116Q80X53 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ccdc116Q80X53 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Ccdc116Q80X53 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ccdc116Q80X53 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ccdc116Q80X53 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Ccdc116Q80X53 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ccdc116Q80X53 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ccdc116Q80X53 AC167022.1-201ENSMUST00000218647 1458 ntBASIC11.51□□□□□ -0.57
Ccdc116Q80X53 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Ccdc116Q80X53 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ccdc116Q80X53 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC11.51□□□□□ -0.57
Ccdc116Q80X53 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ccdc116Q80X53 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Ccdc116Q80X53 Gm37368-201ENSMUST00000193173 3212 ntBASIC11.51□□□□□ -0.57
Ccdc116Q80X53 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC11.51□□□□□ -0.57
Ccdc116Q80X53 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
Ccdc116Q80X53 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Ccdc116Q80X53 Gm42449-201ENSMUST00000200349 2258 ntBASIC11.51□□□□□ -0.57
Ccdc116Q80X53 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Ccdc116Q80X53 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ccdc116Q80X53 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ccdc116Q80X53 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ccdc116Q80X53 Gm15968-201ENSMUST00000119342 1168 ntBASIC11.51□□□□□ -0.57
Ccdc116Q80X53 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ccdc116Q80X53 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Ccdc116Q80X53 Gm25890-201ENSMUST00000177643 165 ntBASIC11.51□□□□□ -0.57
Ccdc116Q80X53 Rnu1b2-201ENSMUST00000178073 165 ntBASIC11.51□□□□□ -0.57
Ccdc116Q80X53 Rnu1b1-201ENSMUST00000178250 165 ntBASIC11.51□□□□□ -0.57
Ccdc116Q80X53 Gm22614-201ENSMUST00000178300 165 ntBASIC11.51□□□□□ -0.57
Ccdc116Q80X53 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Ccdc116Q80X53 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Ccdc116Q80X53 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC11.51□□□□□ -0.57
Ccdc116Q80X53 Gm8913-201ENSMUST00000209491 641 ntBASIC11.51□□□□□ -0.57
Ccdc116Q80X53 Adipoq-201ENSMUST00000023593 1292 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ccdc116Q80X53 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ccdc116Q80X53 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ccdc116Q80X53 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ccdc116Q80X53 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ccdc116Q80X53 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ccdc116Q80X53 Gm22042-201ENSMUST00000082989 165 ntBASIC11.51□□□□□ -0.57
Ccdc116Q80X53 Gm26110-201ENSMUST00000083971 165 ntBASIC11.51□□□□□ -0.57
Ccdc116Q80X53 Gm40377-201ENSMUST00000204604 2015 ntBASIC11.51□□□□□ -0.57
Ccdc116Q80X53 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC11.51□□□□□ -0.57
Ccdc116Q80X53 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ccdc116Q80X53 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ccdc116Q80X53 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Ccdc116Q80X53 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ccdc116Q80X53 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
Ccdc116Q80X53 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ccdc116Q80X53 Rad51c-202ENSMUST00000067692 3944 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ccdc116Q80X53 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Ccdc116Q80X53 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC11.51□□□□□ -0.57
Ccdc116Q80X53 Gm10782-202ENSMUST00000223775 1480 ntBASIC11.51□□□□□ -0.57
Ccdc116Q80X53 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ccdc116Q80X53 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Ccdc116Q80X53 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ccdc116Q80X53 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Ccdc116Q80X53 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC11.5□□□□□ -0.57
Ccdc116Q80X53 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Ccdc116Q80X53 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ccdc116Q80X53 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Ccdc116Q80X53 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ccdc116Q80X53 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ccdc116Q80X53 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ccdc116Q80X53 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC11.5□□□□□ -0.57
Ccdc116Q80X53 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms