Protein–RNA interactions for Protein: Q80WV7

Srrm3, Serine/arginine repetitive matrix protein 3, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm3Q80WV7 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Srrm3Q80WV7 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Srrm3Q80WV7 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Srrm3Q80WV7 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Srrm3Q80WV7 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Srrm3Q80WV7 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Srrm3Q80WV7 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Srrm3Q80WV7 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Srrm3Q80WV7 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Srrm3Q80WV7 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Srrm3Q80WV7 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Srrm3Q80WV7 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Srrm3Q80WV7 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Srrm3Q80WV7 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Srrm3Q80WV7 Gm10782-202ENSMUST00000223775 1480 ntBASIC12.28□□□□□ -0.44
Srrm3Q80WV7 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Srrm3Q80WV7 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Srrm3Q80WV7 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Srrm3Q80WV7 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Srrm3Q80WV7 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Srrm3Q80WV7 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Srrm3Q80WV7 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Srrm3Q80WV7 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Srrm3Q80WV7 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Srrm3Q80WV7 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
Srrm3Q80WV7 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Srrm3Q80WV7 Gm12012-201ENSMUST00000118857 1066 ntBASIC12.28□□□□□ -0.44
Srrm3Q80WV7 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC12.28□□□□□ -0.44
Srrm3Q80WV7 Gm27023-201ENSMUST00000182372 285 ntBASIC12.28□□□□□ -0.44
Srrm3Q80WV7 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC12.28□□□□□ -0.44
Srrm3Q80WV7 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC12.28□□□□□ -0.44
Srrm3Q80WV7 Snhg8-201ENSMUST00000196466 448 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Srrm3Q80WV7 Gm4768-201ENSMUST00000206199 686 ntBASIC12.28□□□□□ -0.44
Srrm3Q80WV7 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC12.28□□□□□ -0.44
Srrm3Q80WV7 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC12.28□□□□□ -0.44
Srrm3Q80WV7 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC12.28□□□□□ -0.44
Srrm3Q80WV7 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Srrm3Q80WV7 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Srrm3Q80WV7 Srp19-201ENSMUST00000072576 876 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Srrm3Q80WV7 Gm10146-201ENSMUST00000072739 309 ntBASIC12.28□□□□□ -0.44
Srrm3Q80WV7 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Srrm3Q80WV7 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Srrm3Q80WV7 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Srrm3Q80WV7 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Srrm3Q80WV7 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Srrm3Q80WV7 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Srrm3Q80WV7 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Srrm3Q80WV7 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC12.28□□□□□ -0.44
Srrm3Q80WV7 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Srrm3Q80WV7 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC12.28□□□□□ -0.44
Srrm3Q80WV7 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Srrm3Q80WV7 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Srrm3Q80WV7 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Srrm3Q80WV7 Usp2-203ENSMUST00000114830 2122 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Srrm3Q80WV7 Acot9-201ENSMUST00000026324 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Srrm3Q80WV7 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Srrm3Q80WV7 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Srrm3Q80WV7 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Srrm3Q80WV7 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Srrm3Q80WV7 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Srrm3Q80WV7 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Srrm3Q80WV7 Thoc5-201ENSMUST00000038237 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Srrm3Q80WV7 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.44
Srrm3Q80WV7 Pex13-201ENSMUST00000020523 4146 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Srrm3Q80WV7 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC12.27□□□□□ -0.44
Srrm3Q80WV7 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Srrm3Q80WV7 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Srrm3Q80WV7 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC12.27□□□□□ -0.44
Srrm3Q80WV7 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Srrm3Q80WV7 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Srrm3Q80WV7 Oas1d-201ENSMUST00000044224 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Srrm3Q80WV7 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Srrm3Q80WV7 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Srrm3Q80WV7 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Srrm3Q80WV7 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC12.27□□□□□ -0.45
Srrm3Q80WV7 Ptges3l-203ENSMUST00000107252 853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Srrm3Q80WV7 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC12.27□□□□□ -0.45
Srrm3Q80WV7 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Srrm3Q80WV7 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC12.27□□□□□ -0.45
Srrm3Q80WV7 Gm14665-201ENSMUST00000122294 557 ntBASIC12.27□□□□□ -0.45
Srrm3Q80WV7 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Srrm3Q80WV7 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Srrm3Q80WV7 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
Srrm3Q80WV7 Gm9550-201ENSMUST00000161130 862 ntBASIC12.27□□□□□ -0.45
Srrm3Q80WV7 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Srrm3Q80WV7 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Srrm3Q80WV7 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC12.27□□□□□ -0.45
Srrm3Q80WV7 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC12.27□□□□□ -0.45
Srrm3Q80WV7 D9Wsu149-201ENSMUST00000214169 594 ntBASIC12.27□□□□□ -0.45
Srrm3Q80WV7 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC12.27□□□□□ -0.45
Srrm3Q80WV7 Morn2-202ENSMUST00000227729 656 ntBASIC12.27□□□□□ -0.45
Srrm3Q80WV7 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Srrm3Q80WV7 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Srrm3Q80WV7 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Srrm3Q80WV7 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Srrm3Q80WV7 AC154537.1-201ENSMUST00000226101 1304 ntBASIC12.27□□□□□ -0.45
Srrm3Q80WV7 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC12.27□□□□□ -0.45
Srrm3Q80WV7 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Srrm3Q80WV7 Gm18782-201ENSMUST00000209023 1399 ntBASIC12.27□□□□□ -0.45
Srrm3Q80WV7 Gm21939-201ENSMUST00000221137 2773 ntBASIC12.27□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 77.7 ms