Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Prpf38bQ80SY5 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Prpf38bQ80SY5 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC12.41□□□□□ -0.42
Prpf38bQ80SY5 Ighv4-2-201ENSMUST00000192975 362 ntBASIC12.41□□□□□ -0.42
Prpf38bQ80SY5 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Prpf38bQ80SY5 Gm45079-201ENSMUST00000205627 461 ntTSL 3 BASIC12.41□□□□□ -0.42
Prpf38bQ80SY5 Gm17827-201ENSMUST00000211825 742 ntBASIC12.41□□□□□ -0.42
Prpf38bQ80SY5 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Prpf38bQ80SY5 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Prpf38bQ80SY5 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Prpf38bQ80SY5 Mir219a-1-201ENSMUST00000083621 110 ntBASIC12.41□□□□□ -0.42
Prpf38bQ80SY5 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Prpf38bQ80SY5 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC12.41□□□□□ -0.42
Prpf38bQ80SY5 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Prpf38bQ80SY5 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC12.41□□□□□ -0.42
Prpf38bQ80SY5 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Prpf38bQ80SY5 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Prpf38bQ80SY5 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Prpf38bQ80SY5 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Prpf38bQ80SY5 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Prpf38bQ80SY5 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC12.41□□□□□ -0.42
Prpf38bQ80SY5 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Prpf38bQ80SY5 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Prpf38bQ80SY5 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Prpf38bQ80SY5 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Prpf38bQ80SY5 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Prpf38bQ80SY5 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Prpf38bQ80SY5 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Prpf38bQ80SY5 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Prpf38bQ80SY5 Gm36987-201ENSMUST00000194704 2979 ntBASIC12.4□□□□□ -0.42
Prpf38bQ80SY5 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Prpf38bQ80SY5 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Prpf38bQ80SY5 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Prpf38bQ80SY5 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Prpf38bQ80SY5 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Prpf38bQ80SY5 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Prpf38bQ80SY5 Gm23596-201ENSMUST00000104304 132 ntBASIC12.4□□□□□ -0.42
Prpf38bQ80SY5 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Prpf38bQ80SY5 Gm15036-201ENSMUST00000118880 400 ntBASIC12.4□□□□□ -0.42
Prpf38bQ80SY5 Gm13394-201ENSMUST00000121658 1000 ntBASIC12.4□□□□□ -0.42
Prpf38bQ80SY5 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC12.4□□□□□ -0.42
Prpf38bQ80SY5 Gm16271-201ENSMUST00000162837 220 ntTSL 5 BASIC12.4□□□□□ -0.42
Prpf38bQ80SY5 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC12.4□□□□□ -0.42
Prpf38bQ80SY5 Gm27910-201ENSMUST00000185004 107 ntBASIC12.4□□□□□ -0.42
Prpf38bQ80SY5 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC12.4□□□□□ -0.42
Prpf38bQ80SY5 Gm45909-201ENSMUST00000212413 1031 ntBASIC12.4□□□□□ -0.42
Prpf38bQ80SY5 AC166341.2-201ENSMUST00000220571 120 ntBASIC12.4□□□□□ -0.42
Prpf38bQ80SY5 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Prpf38bQ80SY5 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Prpf38bQ80SY5 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC12.4□□□□□ -0.42
Prpf38bQ80SY5 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Prpf38bQ80SY5 Gm9361-201ENSMUST00000198695 1507 ntBASIC12.4□□□□□ -0.42
Prpf38bQ80SY5 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Prpf38bQ80SY5 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC12.4□□□□□ -0.42
Prpf38bQ80SY5 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Prpf38bQ80SY5 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Prpf38bQ80SY5 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Prpf38bQ80SY5 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Prpf38bQ80SY5 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Prpf38bQ80SY5 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Prpf38bQ80SY5 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC12.4□□□□□ -0.42
Prpf38bQ80SY5 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC12.4□□□□□ -0.43
Prpf38bQ80SY5 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.43
Prpf38bQ80SY5 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC12.4□□□□□ -0.43
Prpf38bQ80SY5 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.43
Prpf38bQ80SY5 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC12.4□□□□□ -0.43
Prpf38bQ80SY5 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Prpf38bQ80SY5 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Prpf38bQ80SY5 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Prpf38bQ80SY5 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Prpf38bQ80SY5 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Prpf38bQ80SY5 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Prpf38bQ80SY5 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Prpf38bQ80SY5 Cenpx-203ENSMUST00000106154 873 ntTSL 2 BASIC12.39□□□□□ -0.43
Prpf38bQ80SY5 Gm13809-201ENSMUST00000117921 597 ntBASIC12.39□□□□□ -0.43
Prpf38bQ80SY5 Gm5909-201ENSMUST00000119768 1281 ntBASIC12.39□□□□□ -0.43
Prpf38bQ80SY5 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC12.39□□□□□ -0.43
Prpf38bQ80SY5 Gm1848-201ENSMUST00000120711 789 ntBASIC12.39□□□□□ -0.43
Prpf38bQ80SY5 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC12.39□□□□□ -0.43
Prpf38bQ80SY5 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC12.39□□□□□ -0.43
Prpf38bQ80SY5 Gm6397-201ENSMUST00000161973 1069 ntBASIC12.39□□□□□ -0.43
Prpf38bQ80SY5 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC12.39□□□□□ -0.43
Prpf38bQ80SY5 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Prpf38bQ80SY5 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Prpf38bQ80SY5 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Prpf38bQ80SY5 9330179D12Rik-201ENSMUST00000180569 1105 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Prpf38bQ80SY5 Gm28923-201ENSMUST00000187755 322 ntBASIC12.39□□□□□ -0.43
Prpf38bQ80SY5 Gm42682-201ENSMUST00000198349 1265 ntBASIC12.39□□□□□ -0.43
Prpf38bQ80SY5 Gm35713-201ENSMUST00000210516 199 ntBASIC12.39□□□□□ -0.43
Prpf38bQ80SY5 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
Prpf38bQ80SY5 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC12.39□□□□□ -0.43
Prpf38bQ80SY5 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Prpf38bQ80SY5 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Prpf38bQ80SY5 Actg1-201ENSMUST00000062147 876 ntTSL 3 BASIC12.39□□□□□ -0.43
Prpf38bQ80SY5 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC12.39□□□□□ -0.43
Prpf38bQ80SY5 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Prpf38bQ80SY5 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Prpf38bQ80SY5 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Prpf38bQ80SY5 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Prpf38bQ80SY5 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms