Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Ubfd1Q78JW9 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Ubfd1Q78JW9 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ubfd1Q78JW9 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Ubfd1Q78JW9 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ubfd1Q78JW9 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Ubfd1Q78JW9 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ubfd1Q78JW9 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ubfd1Q78JW9 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Ubfd1Q78JW9 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ubfd1Q78JW9 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC11.45□□□□□ -0.58
Ubfd1Q78JW9 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC11.45□□□□□ -0.58
Ubfd1Q78JW9 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ubfd1Q78JW9 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Ubfd1Q78JW9 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Ubfd1Q78JW9 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ubfd1Q78JW9 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ubfd1Q78JW9 Gm13888-201ENSMUST00000119148 422 ntBASIC11.45□□□□□ -0.58
Ubfd1Q78JW9 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ubfd1Q78JW9 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC11.45□□□□□ -0.58
Ubfd1Q78JW9 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Ubfd1Q78JW9 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC11.45□□□□□ -0.58
Ubfd1Q78JW9 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC11.45□□□□□ -0.58
Ubfd1Q78JW9 Gm9463-201ENSMUST00000206707 601 ntBASIC11.45□□□□□ -0.58
Ubfd1Q78JW9 AC134869.4-202ENSMUST00000224350 837 ntBASIC11.45□□□□□ -0.58
Ubfd1Q78JW9 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ubfd1Q78JW9 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ubfd1Q78JW9 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC11.45□□□□□ -0.58
Ubfd1Q78JW9 AC158355.1-201ENSMUST00000215895 1705 ntBASIC11.45□□□□□ -0.58
Ubfd1Q78JW9 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ubfd1Q78JW9 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ubfd1Q78JW9 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Ubfd1Q78JW9 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ubfd1Q78JW9 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Ubfd1Q78JW9 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ubfd1Q78JW9 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ubfd1Q78JW9 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Ubfd1Q78JW9 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ubfd1Q78JW9 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Ubfd1Q78JW9 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ubfd1Q78JW9 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ubfd1Q78JW9 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Ubfd1Q78JW9 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ubfd1Q78JW9 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ubfd1Q78JW9 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ubfd1Q78JW9 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
Ubfd1Q78JW9 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ubfd1Q78JW9 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC11.44□□□□□ -0.58
Ubfd1Q78JW9 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ubfd1Q78JW9 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC11.44□□□□□ -0.58
Ubfd1Q78JW9 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Ubfd1Q78JW9 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC11.44□□□□□ -0.58
Ubfd1Q78JW9 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ubfd1Q78JW9 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ubfd1Q78JW9 Gm19692-201ENSMUST00000203856 2084 ntBASIC11.44□□□□□ -0.58
Ubfd1Q78JW9 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ubfd1Q78JW9 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Ubfd1Q78JW9 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ubfd1Q78JW9 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ubfd1Q78JW9 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Ubfd1Q78JW9 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC11.44□□□□□ -0.58
Ubfd1Q78JW9 Gm11667-201ENSMUST00000119828 486 ntBASIC11.44□□□□□ -0.58
Ubfd1Q78JW9 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC11.44□□□□□ -0.58
Ubfd1Q78JW9 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Ubfd1Q78JW9 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC11.44□□□□□ -0.58
Ubfd1Q78JW9 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC11.44□□□□□ -0.58
Ubfd1Q78JW9 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC11.44□□□□□ -0.58
Ubfd1Q78JW9 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Ubfd1Q78JW9 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC11.44□□□□□ -0.58
Ubfd1Q78JW9 Gm8459-201ENSMUST00000162504 760 ntBASIC11.44□□□□□ -0.58
Ubfd1Q78JW9 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Ubfd1Q78JW9 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Ubfd1Q78JW9 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Ubfd1Q78JW9 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ubfd1Q78JW9 Mir8115-201ENSMUST00000184992 119 ntBASIC11.44□□□□□ -0.58
Ubfd1Q78JW9 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC11.44□□□□□ -0.58
Ubfd1Q78JW9 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Ubfd1Q78JW9 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC11.44□□□□□ -0.58
Ubfd1Q78JW9 Gm44421-201ENSMUST00000205064 1221 ntBASIC11.44□□□□□ -0.58
Ubfd1Q78JW9 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC11.44□□□□□ -0.58
Ubfd1Q78JW9 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC11.44□□□□□ -0.58
Ubfd1Q78JW9 AC153505.1-201ENSMUST00000218819 1071 ntBASIC11.44□□□□□ -0.58
Ubfd1Q78JW9 AC129219.2-201ENSMUST00000224324 701 ntBASIC11.44□□□□□ -0.58
Ubfd1Q78JW9 AC154257.1-202ENSMUST00000224729 843 ntBASIC11.44□□□□□ -0.58
Ubfd1Q78JW9 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ubfd1Q78JW9 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Ubfd1Q78JW9 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Ubfd1Q78JW9 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ubfd1Q78JW9 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC11.44□□□□□ -0.58
Ubfd1Q78JW9 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ubfd1Q78JW9 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ubfd1Q78JW9 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ubfd1Q78JW9 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ubfd1Q78JW9 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ubfd1Q78JW9 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Ubfd1Q78JW9 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC11.44□□□□□ -0.58
Ubfd1Q78JW9 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Ubfd1Q78JW9 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ubfd1Q78JW9 Gm19817-201ENSMUST00000199764 2132 ntBASIC11.44□□□□□ -0.58
Ubfd1Q78JW9 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 68 ms