Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC11.55□□□□□ -0.56
Scaf4Q6PFF0 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
Scaf4Q6PFF0 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Scaf4Q6PFF0 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Scaf4Q6PFF0 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Scaf4Q6PFF0 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC11.55□□□□□ -0.56
Scaf4Q6PFF0 Gm43118-201ENSMUST00000199149 775 ntBASIC11.55□□□□□ -0.56
Scaf4Q6PFF0 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC11.55□□□□□ -0.56
Scaf4Q6PFF0 AC126253.1-201ENSMUST00000227974 824 ntBASIC11.55□□□□□ -0.56
Scaf4Q6PFF0 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Scaf4Q6PFF0 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Scaf4Q6PFF0 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Scaf4Q6PFF0 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Scaf4Q6PFF0 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Scaf4Q6PFF0 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Scaf4Q6PFF0 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Scaf4Q6PFF0 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Scaf4Q6PFF0 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Scaf4Q6PFF0 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Scaf4Q6PFF0 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Scaf4Q6PFF0 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Scaf4Q6PFF0 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Scaf4Q6PFF0 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Scaf4Q6PFF0 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Scaf4Q6PFF0 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Scaf4Q6PFF0 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Scaf4Q6PFF0 Gm38089-201ENSMUST00000193585 1514 ntBASIC11.55□□□□□ -0.56
Scaf4Q6PFF0 Dctn4-202ENSMUST00000223590 1530 ntBASIC11.55□□□□□ -0.56
Scaf4Q6PFF0 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Scaf4Q6PFF0 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Scaf4Q6PFF0 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Scaf4Q6PFF0 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Scaf4Q6PFF0 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Scaf4Q6PFF0 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC11.54□□□□□ -0.56
Scaf4Q6PFF0 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Scaf4Q6PFF0 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC11.54□□□□□ -0.56
Scaf4Q6PFF0 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Scaf4Q6PFF0 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Scaf4Q6PFF0 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
Scaf4Q6PFF0 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Scaf4Q6PFF0 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Scaf4Q6PFF0 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Scaf4Q6PFF0 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Scaf4Q6PFF0 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Scaf4Q6PFF0 Flad1-202ENSMUST00000107426 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Scaf4Q6PFF0 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Scaf4Q6PFF0 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Scaf4Q6PFF0 Gm25214-201ENSMUST00000104573 129 ntBASIC11.54□□□□□ -0.56
Scaf4Q6PFF0 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC11.54□□□□□ -0.56
Scaf4Q6PFF0 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Scaf4Q6PFF0 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Scaf4Q6PFF0 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC11.54□□□□□ -0.56
Scaf4Q6PFF0 Gm8835-201ENSMUST00000173096 1169 ntBASIC11.54□□□□□ -0.56
Scaf4Q6PFF0 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC11.54□□□□□ -0.56
Scaf4Q6PFF0 Gm7653-201ENSMUST00000214567 508 ntBASIC11.54□□□□□ -0.56
Scaf4Q6PFF0 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Scaf4Q6PFF0 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Scaf4Q6PFF0 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Scaf4Q6PFF0 Gm5740-201ENSMUST00000211003 1857 ntBASIC11.54□□□□□ -0.56
Scaf4Q6PFF0 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC11.54□□□□□ -0.56
Scaf4Q6PFF0 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Scaf4Q6PFF0 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Scaf4Q6PFF0 Slc2a10-201ENSMUST00000029196 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Scaf4Q6PFF0 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Scaf4Q6PFF0 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Scaf4Q6PFF0 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Scaf4Q6PFF0 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Scaf4Q6PFF0 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Scaf4Q6PFF0 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Scaf4Q6PFF0 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Scaf4Q6PFF0 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Scaf4Q6PFF0 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Scaf4Q6PFF0 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Scaf4Q6PFF0 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC11.54□□□□□ -0.56
Scaf4Q6PFF0 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Scaf4Q6PFF0 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Scaf4Q6PFF0 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Scaf4Q6PFF0 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Scaf4Q6PFF0 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC11.53□□□□□ -0.56
Scaf4Q6PFF0 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Scaf4Q6PFF0 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Scaf4Q6PFF0 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC11.53□□□□□ -0.56
Scaf4Q6PFF0 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Scaf4Q6PFF0 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Scaf4Q6PFF0 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC11.53□□□□□ -0.56
Scaf4Q6PFF0 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Scaf4Q6PFF0 Gm22018-201ENSMUST00000104357 131 ntBASIC11.53□□□□□ -0.56
Scaf4Q6PFF0 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Scaf4Q6PFF0 Gm14644-201ENSMUST00000116671 647 ntBASIC11.53□□□□□ -0.56
Scaf4Q6PFF0 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Scaf4Q6PFF0 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC11.53□□□□□ -0.56
Scaf4Q6PFF0 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Scaf4Q6PFF0 Gm9034-201ENSMUST00000182071 1005 ntBASIC11.53□□□□□ -0.56
Scaf4Q6PFF0 Gm8565-201ENSMUST00000183259 1014 ntBASIC11.53□□□□□ -0.56
Scaf4Q6PFF0 Gm8176-201ENSMUST00000191297 1099 ntBASIC11.53□□□□□ -0.56
Scaf4Q6PFF0 Gm37008-201ENSMUST00000195712 319 ntBASIC11.53□□□□□ -0.56
Scaf4Q6PFF0 Gm6439-201ENSMUST00000199849 862 ntBASIC11.53□□□□□ -0.56
Scaf4Q6PFF0 Gm19287-201ENSMUST00000203190 358 ntBASIC11.53□□□□□ -0.56
Scaf4Q6PFF0 Gm6266-201ENSMUST00000203844 806 ntBASIC11.53□□□□□ -0.56
Scaf4Q6PFF0 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC11.53□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 83 ms