Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ift88Q61371 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Ift88Q61371 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ift88Q61371 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Ift88Q61371 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ift88Q61371 Gm11222-201ENSMUST00000119005 738 ntBASIC12.94□□□□□ -0.34
Ift88Q61371 Gm15004-201ENSMUST00000119192 630 ntBASIC12.94□□□□□ -0.34
Ift88Q61371 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC12.94□□□□□ -0.34
Ift88Q61371 Trav4d-2-201ENSMUST00000120914 335 ntBASIC12.94□□□□□ -0.34
Ift88Q61371 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ift88Q61371 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC12.94□□□□□ -0.34
Ift88Q61371 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC12.94□□□□□ -0.34
Ift88Q61371 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC12.94□□□□□ -0.34
Ift88Q61371 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
Ift88Q61371 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC12.94□□□□□ -0.34
Ift88Q61371 Gm5745-201ENSMUST00000183748 313 ntBASIC12.94□□□□□ -0.34
Ift88Q61371 Gm5455-201ENSMUST00000058710 715 ntBASIC12.94□□□□□ -0.34
Ift88Q61371 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ift88Q61371 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ift88Q61371 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC12.94□□□□□ -0.34
Ift88Q61371 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ift88Q61371 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ift88Q61371 Gm44207-201ENSMUST00000204568 1424 ntBASIC12.94□□□□□ -0.34
Ift88Q61371 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ift88Q61371 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Ift88Q61371 Gm18806-201ENSMUST00000207607 1775 ntBASIC12.94□□□□□ -0.34
Ift88Q61371 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ift88Q61371 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ift88Q61371 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Ift88Q61371 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ift88Q61371 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ift88Q61371 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ift88Q61371 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Ift88Q61371 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ift88Q61371 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
Ift88Q61371 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ift88Q61371 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ift88Q61371 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ift88Q61371 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ift88Q61371 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ift88Q61371 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ift88Q61371 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ift88Q61371 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ift88Q61371 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ift88Q61371 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Ift88Q61371 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC12.93□□□□□ -0.34
Ift88Q61371 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ift88Q61371 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC12.93□□□□□ -0.34
Ift88Q61371 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ift88Q61371 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC12.93□□□□□ -0.34
Ift88Q61371 Gm31256-201ENSMUST00000194705 506 ntBASIC12.93□□□□□ -0.34
Ift88Q61371 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC12.93□□□□□ -0.34
Ift88Q61371 Gm18935-201ENSMUST00000212692 664 ntBASIC12.93□□□□□ -0.34
Ift88Q61371 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC12.93□□□□□ -0.34
Ift88Q61371 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC12.93□□□□□ -0.34
Ift88Q61371 Gzmn-202ENSMUST00000225535 989 ntBASIC12.93□□□□□ -0.34
Ift88Q61371 AC121960.1-201ENSMUST00000227982 564 ntBASIC12.93□□□□□ -0.34
Ift88Q61371 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ift88Q61371 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ift88Q61371 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC12.93□□□□□ -0.34
Ift88Q61371 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ift88Q61371 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ift88Q61371 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ift88Q61371 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC12.93□□□□□ -0.34
Ift88Q61371 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ift88Q61371 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ift88Q61371 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ift88Q61371 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ift88Q61371 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Ift88Q61371 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ift88Q61371 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ift88Q61371 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ift88Q61371 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ift88Q61371 AC122291.1-201ENSMUST00000228937 5748 ntBASIC12.93□□□□□ -0.34
Ift88Q61371 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ift88Q61371 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ift88Q61371 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ift88Q61371 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ift88Q61371 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ift88Q61371 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ift88Q61371 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Ift88Q61371 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ift88Q61371 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ift88Q61371 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ift88Q61371 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC12.92□□□□□ -0.34
Ift88Q61371 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ift88Q61371 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Ift88Q61371 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ift88Q61371 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Ift88Q61371 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ift88Q61371 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Ift88Q61371 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ift88Q61371 Gm11930-201ENSMUST00000117788 190 ntBASIC12.92□□□□□ -0.34
Ift88Q61371 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ift88Q61371 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ift88Q61371 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ift88Q61371 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ift88Q61371 Gm27572-201ENSMUST00000183702 255 ntBASIC12.92□□□□□ -0.34
Ift88Q61371 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Ift88Q61371 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms