Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Gm9257-201ENSMUST00000221254 232 ntBASIC11.59□□□□□ -0.55
Scn2bQ56A07 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC11.59□□□□□ -0.55
Scn2bQ56A07 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Scn2bQ56A07 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Scn2bQ56A07 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Scn2bQ56A07 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Scn2bQ56A07 Gm22042-201ENSMUST00000082989 165 ntBASIC11.59□□□□□ -0.55
Scn2bQ56A07 Gm26110-201ENSMUST00000083971 165 ntBASIC11.59□□□□□ -0.55
Scn2bQ56A07 Gm37014-201ENSMUST00000194723 2253 ntBASIC11.59□□□□□ -0.55
Scn2bQ56A07 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Scn2bQ56A07 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Scn2bQ56A07 Cad-211ENSMUST00000202795 6559 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Scn2bQ56A07 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Scn2bQ56A07 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Scn2bQ56A07 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Scn2bQ56A07 AC164426.2-201ENSMUST00000225993 2492 ntBASIC11.59□□□□□ -0.55
Scn2bQ56A07 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC11.59□□□□□ -0.55
Scn2bQ56A07 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Scn2bQ56A07 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Scn2bQ56A07 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC11.58□□□□□ -0.55
Scn2bQ56A07 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.55
Scn2bQ56A07 Gm6560-201ENSMUST00000198588 1591 ntBASIC11.58□□□□□ -0.55
Scn2bQ56A07 AC123857.2-201ENSMUST00000225756 1582 ntBASIC11.58□□□□□ -0.55
Scn2bQ56A07 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Scn2bQ56A07 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Scn2bQ56A07 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Scn2bQ56A07 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Scn2bQ56A07 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Scn2bQ56A07 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC11.58□□□□□ -0.56
Scn2bQ56A07 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC11.58□□□□□ -0.56
Scn2bQ56A07 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Scn2bQ56A07 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Scn2bQ56A07 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Scn2bQ56A07 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC11.58□□□□□ -0.56
Scn2bQ56A07 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Scn2bQ56A07 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Scn2bQ56A07 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Scn2bQ56A07 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Scn2bQ56A07 Gm11960-201ENSMUST00000122068 925 ntBASIC11.58□□□□□ -0.56
Scn2bQ56A07 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Scn2bQ56A07 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Scn2bQ56A07 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Scn2bQ56A07 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Scn2bQ56A07 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC11.58□□□□□ -0.56
Scn2bQ56A07 Gm5070-201ENSMUST00000177599 862 ntBASIC11.58□□□□□ -0.56
Scn2bQ56A07 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Scn2bQ56A07 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Scn2bQ56A07 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Scn2bQ56A07 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC11.58□□□□□ -0.56
Scn2bQ56A07 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC11.58□□□□□ -0.56
Scn2bQ56A07 Gm38317-201ENSMUST00000195564 343 ntBASIC11.58□□□□□ -0.56
Scn2bQ56A07 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC11.58□□□□□ -0.56
Scn2bQ56A07 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Scn2bQ56A07 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC11.58□□□□□ -0.56
Scn2bQ56A07 Gm4607-201ENSMUST00000206649 577 ntBASIC11.58□□□□□ -0.56
Scn2bQ56A07 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC11.58□□□□□ -0.56
Scn2bQ56A07 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC11.58□□□□□ -0.56
Scn2bQ56A07 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC11.58□□□□□ -0.56
Scn2bQ56A07 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Scn2bQ56A07 Lect2-202ENSMUST00000225183 823 ntBASIC11.58□□□□□ -0.56
Scn2bQ56A07 Gzmn-202ENSMUST00000225535 989 ntBASIC11.58□□□□□ -0.56
Scn2bQ56A07 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Scn2bQ56A07 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Scn2bQ56A07 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Scn2bQ56A07 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Scn2bQ56A07 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Scn2bQ56A07 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Scn2bQ56A07 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Scn2bQ56A07 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
Scn2bQ56A07 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Scn2bQ56A07 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Scn2bQ56A07 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Scn2bQ56A07 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Scn2bQ56A07 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Scn2bQ56A07 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Scn2bQ56A07 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Scn2bQ56A07 Gm21136-201ENSMUST00000186812 2575 ntBASIC11.58□□□□□ -0.56
Scn2bQ56A07 Gm6605-201ENSMUST00000031488 2574 ntBASIC11.58□□□□□ -0.56
Scn2bQ56A07 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Scn2bQ56A07 Gm43963-201ENSMUST00000203466 2488 ntBASIC11.58□□□□□ -0.56
Scn2bQ56A07 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC11.57□□□□□ -0.56
Scn2bQ56A07 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Scn2bQ56A07 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Scn2bQ56A07 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Scn2bQ56A07 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Scn2bQ56A07 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Scn2bQ56A07 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Scn2bQ56A07 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Scn2bQ56A07 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Scn2bQ56A07 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Scn2bQ56A07 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Scn2bQ56A07 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Scn2bQ56A07 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC11.57□□□□□ -0.56
Scn2bQ56A07 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Scn2bQ56A07 Gm11989-201ENSMUST00000117240 672 ntBASIC11.57□□□□□ -0.56
Scn2bQ56A07 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Scn2bQ56A07 Gm11362-201ENSMUST00000118838 850 ntBASIC11.57□□□□□ -0.56
Scn2bQ56A07 Gm12749-201ENSMUST00000122138 1159 ntBASIC11.57□□□□□ -0.56
Scn2bQ56A07 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC11.57□□□□□ -0.56
Scn2bQ56A07 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms