Protein–RNA interactions for Protein: Q08423

Tff1, Trefoil factor 1, mousemouse

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff1Q08423 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC9.77□□□□□ -0.85
Tff1Q08423 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Tff1Q08423 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Tff1Q08423 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC9.77□□□□□ -0.85
Tff1Q08423 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Tff1Q08423 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC9.77□□□□□ -0.85
Tff1Q08423 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Tff1Q08423 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC9.77□□□□□ -0.85
Tff1Q08423 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
Tff1Q08423 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Tff1Q08423 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC9.77□□□□□ -0.85
Tff1Q08423 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Tff1Q08423 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Tff1Q08423 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Tff1Q08423 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Tff1Q08423 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Tff1Q08423 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC9.77□□□□□ -0.85
Tff1Q08423 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC9.77□□□□□ -0.85
Tff1Q08423 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Tff1Q08423 Gm45776-201ENSMUST00000212366 1522 ntBASIC9.77□□□□□ -0.85
Tff1Q08423 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC9.77□□□□□ -0.85
Tff1Q08423 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Tff1Q08423 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
Tff1Q08423 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
Tff1Q08423 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Tff1Q08423 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
Tff1Q08423 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Tff1Q08423 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Tff1Q08423 Eef2k-201ENSMUST00000047875 6580 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Tff1Q08423 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC9.76□□□□□ -0.85
Tff1Q08423 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC9.76□□□□□ -0.85
Tff1Q08423 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Tff1Q08423 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Tff1Q08423 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Tff1Q08423 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC9.76□□□□□ -0.85
Tff1Q08423 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Tff1Q08423 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
Tff1Q08423 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Tff1Q08423 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Tff1Q08423 Ptgfr-201ENSMUST00000029670 6624 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Tff1Q08423 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Tff1Q08423 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Tff1Q08423 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Tff1Q08423 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Tff1Q08423 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Tff1Q08423 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Tff1Q08423 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
Tff1Q08423 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC9.76□□□□□ -0.85
Tff1Q08423 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Tff1Q08423 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC9.76□□□□□ -0.85
Tff1Q08423 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Tff1Q08423 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC9.76□□□□□ -0.85
Tff1Q08423 Gm5523-201ENSMUST00000180415 997 ntBASIC9.76□□□□□ -0.85
Tff1Q08423 Gm27046-201ENSMUST00000182160 463 ntBASIC9.76□□□□□ -0.85
Tff1Q08423 Gm28450-201ENSMUST00000187349 638 ntBASIC9.76□□□□□ -0.85
Tff1Q08423 Gm43830-201ENSMUST00000198760 1067 ntBASIC9.76□□□□□ -0.85
Tff1Q08423 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC9.76□□□□□ -0.85
Tff1Q08423 Gm17931-201ENSMUST00000208132 634 ntBASIC9.76□□□□□ -0.85
Tff1Q08423 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC9.76□□□□□ -0.85
Tff1Q08423 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Tff1Q08423 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC9.76□□□□□ -0.85
Tff1Q08423 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Tff1Q08423 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Tff1Q08423 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Tff1Q08423 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Tff1Q08423 Gm37849-201ENSMUST00000194722 1881 ntBASIC9.76□□□□□ -0.85
Tff1Q08423 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Tff1Q08423 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Tff1Q08423 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Tff1Q08423 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Tff1Q08423 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Tff1Q08423 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Tff1Q08423 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Tff1Q08423 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Tff1Q08423 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Tff1Q08423 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC9.76□□□□□ -0.85
Tff1Q08423 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Tff1Q08423 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
Tff1Q08423 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Tff1Q08423 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Tff1Q08423 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Tff1Q08423 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Tff1Q08423 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Tff1Q08423 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Tff1Q08423 AC124397.2-201ENSMUST00000225575 2215 ntBASIC9.75□□□□□ -0.85
Tff1Q08423 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Tff1Q08423 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC9.75□□□□□ -0.85
Tff1Q08423 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Tff1Q08423 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Tff1Q08423 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC9.75□□□□□ -0.85
Tff1Q08423 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC9.75□□□□□ -0.85
Tff1Q08423 Gm5597-201ENSMUST00000182353 1193 ntBASIC9.75□□□□□ -0.85
Tff1Q08423 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC9.75□□□□□ -0.85
Tff1Q08423 AU022133-201ENSMUST00000200601 873 ntBASIC9.75□□□□□ -0.85
Tff1Q08423 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC9.75□□□□□ -0.85
Tff1Q08423 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC9.75□□□□□ -0.85
Tff1Q08423 AC153929.1-201ENSMUST00000219009 303 ntBASIC9.75□□□□□ -0.85
Tff1Q08423 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC9.75□□□□□ -0.85
Tff1Q08423 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Tff1Q08423 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC9.75□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms