Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC10.03□□□□□ -0.8
Smn1P97801 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Smn1P97801 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Smn1P97801 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Smn1P97801 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Smn1P97801 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Smn1P97801 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Smn1P97801 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Smn1P97801 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
Smn1P97801 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Smn1P97801 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Smn1P97801 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Smn1P97801 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Smn1P97801 Gm6023-201ENSMUST00000118217 606 ntBASIC10.03□□□□□ -0.8
Smn1P97801 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC10.03□□□□□ -0.8
Smn1P97801 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Smn1P97801 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Smn1P97801 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Smn1P97801 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC10.03□□□□□ -0.8
Smn1P97801 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Smn1P97801 Gm29358-202ENSMUST00000187941 3227 ntBASIC10.03□□□□□ -0.8
Smn1P97801 Gm38241-201ENSMUST00000192641 898 ntBASIC10.03□□□□□ -0.8
Smn1P97801 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Smn1P97801 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC10.03□□□□□ -0.8
Smn1P97801 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC10.03□□□□□ -0.8
Smn1P97801 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC10.03□□□□□ -0.8
Smn1P97801 Armc1-201ENSMUST00000029125 3673 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Smn1P97801 Cox17-201ENSMUST00000050273 444 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Smn1P97801 Gm10254-201ENSMUST00000052888 867 ntBASIC10.03□□□□□ -0.8
Smn1P97801 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Smn1P97801 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Smn1P97801 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Smn1P97801 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC10.03□□□□□ -0.8
Smn1P97801 Ppp1r18-201ENSMUST00000113814 3131 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Smn1P97801 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Smn1P97801 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
Smn1P97801 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Smn1P97801 Htr1b-202ENSMUST00000183482 4724 ntAPPRIS P1 TSL 3 BASIC10.03□□□□□ -0.8
Smn1P97801 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Smn1P97801 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
Smn1P97801 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Smn1P97801 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC10.03□□□□□ -0.8
Smn1P97801 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Smn1P97801 Megf11-202ENSMUST00000093829 3652 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Smn1P97801 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Smn1P97801 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Smn1P97801 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Smn1P97801 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.8
Smn1P97801 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Smn1P97801 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
Smn1P97801 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.8
Smn1P97801 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
Smn1P97801 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC10.02□□□□□ -0.8
Smn1P97801 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Smn1P97801 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Smn1P97801 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Smn1P97801 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Smn1P97801 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
Smn1P97801 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Smn1P97801 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC10.02□□□□□ -0.81
Smn1P97801 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
Smn1P97801 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC10.02□□□□□ -0.81
Smn1P97801 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Smn1P97801 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
Smn1P97801 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Smn1P97801 Gm8801-201ENSMUST00000173255 1064 ntBASIC10.02□□□□□ -0.81
Smn1P97801 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC10.02□□□□□ -0.81
Smn1P97801 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC10.02□□□□□ -0.81
Smn1P97801 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC10.02□□□□□ -0.81
Smn1P97801 Gm19963-201ENSMUST00000208413 1255 ntBASIC10.02□□□□□ -0.81
Smn1P97801 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Smn1P97801 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC10.02□□□□□ -0.81
Smn1P97801 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Smn1P97801 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Smn1P97801 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
Smn1P97801 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Smn1P97801 Ntrk2-207ENSMUST00000225488 4706 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
Smn1P97801 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Smn1P97801 D830039M14Rik-202ENSMUST00000217740 3362 ntBASIC10.02□□□□□ -0.81
Smn1P97801 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Smn1P97801 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Smn1P97801 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Smn1P97801 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Smn1P97801 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Smn1P97801 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Smn1P97801 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
Smn1P97801 Arhgef4-204ENSMUST00000159747 6514 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
Smn1P97801 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Smn1P97801 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Smn1P97801 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Smn1P97801 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Smn1P97801 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Smn1P97801 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Smn1P97801 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Smn1P97801 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC10.01□□□□□ -0.81
Smn1P97801 AC123857.2-201ENSMUST00000225756 1582 ntBASIC10.01□□□□□ -0.81
Smn1P97801 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Smn1P97801 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Smn1P97801 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC10.01□□□□□ -0.81
Smn1P97801 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 70.1 ms