Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Gm12579-201ENSMUST00000118040 783 ntBASIC12.75□□□□□ -0.37
Trim43cP86449 Gm12266-201ENSMUST00000120311 962 ntBASIC12.75□□□□□ -0.37
Trim43cP86449 Gm15595-201ENSMUST00000120840 961 ntBASIC12.75□□□□□ -0.37
Trim43cP86449 Gm8199-201ENSMUST00000121323 823 ntBASIC12.75□□□□□ -0.37
Trim43cP86449 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC12.75□□□□□ -0.37
Trim43cP86449 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trim43cP86449 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trim43cP86449 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Trim43cP86449 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC12.75□□□□□ -0.37
Trim43cP86449 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trim43cP86449 Gm18734-201ENSMUST00000172937 808 ntBASIC12.75□□□□□ -0.37
Trim43cP86449 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim43cP86449 Gm10807-201ENSMUST00000177134 795 ntBASIC12.75□□□□□ -0.37
Trim43cP86449 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC12.75□□□□□ -0.37
Trim43cP86449 Gm5852-201ENSMUST00000194119 1021 ntBASIC12.75□□□□□ -0.37
Trim43cP86449 Gm43102-201ENSMUST00000201004 2324 ntBASIC12.75□□□□□ -0.37
Trim43cP86449 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC12.75□□□□□ -0.37
Trim43cP86449 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC12.75□□□□□ -0.37
Trim43cP86449 Gm5369-201ENSMUST00000217499 588 ntBASIC12.75□□□□□ -0.37
Trim43cP86449 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim43cP86449 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Trim43cP86449 CT573034.1-201ENSMUST00000222983 313 ntBASIC12.75□□□□□ -0.37
Trim43cP86449 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim43cP86449 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC12.75□□□□□ -0.37
Trim43cP86449 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim43cP86449 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim43cP86449 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Trim43cP86449 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim43cP86449 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim43cP86449 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim43cP86449 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim43cP86449 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC12.75□□□□□ -0.37
Trim43cP86449 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim43cP86449 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim43cP86449 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim43cP86449 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim43cP86449 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim43cP86449 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim43cP86449 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim43cP86449 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim43cP86449 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trim43cP86449 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Trim43cP86449 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trim43cP86449 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Trim43cP86449 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Trim43cP86449 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim43cP86449 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC12.74□□□□□ -0.37
Trim43cP86449 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trim43cP86449 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC12.74□□□□□ -0.37
Trim43cP86449 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trim43cP86449 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Trim43cP86449 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Trim43cP86449 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trim43cP86449 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC12.74□□□□□ -0.37
Trim43cP86449 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim43cP86449 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim43cP86449 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim43cP86449 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Trim43cP86449 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim43cP86449 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Trim43cP86449 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC12.74□□□□□ -0.37
Trim43cP86449 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim43cP86449 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim43cP86449 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
Trim43cP86449 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC12.74□□□□□ -0.37
Trim43cP86449 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC12.74□□□□□ -0.37
Trim43cP86449 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Trim43cP86449 Gm20495-201ENSMUST00000173902 235 ntBASIC12.74□□□□□ -0.37
Trim43cP86449 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Trim43cP86449 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
Trim43cP86449 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Trim43cP86449 Gm26787-201ENSMUST00000180474 608 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trim43cP86449 Gm29199-201ENSMUST00000187766 775 ntBASIC12.74□□□□□ -0.37
Trim43cP86449 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC12.74□□□□□ -0.37
Trim43cP86449 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC12.74□□□□□ -0.37
Trim43cP86449 Gm42682-201ENSMUST00000198349 1265 ntBASIC12.74□□□□□ -0.37
Trim43cP86449 Gm18730-201ENSMUST00000218038 343 ntBASIC12.74□□□□□ -0.37
Trim43cP86449 CT025694.1-201ENSMUST00000226188 934 ntBASIC12.74□□□□□ -0.37
Trim43cP86449 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Trim43cP86449 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC12.74□□□□□ -0.37
Trim43cP86449 Gm21811-201ENSMUST00000096485 930 ntBASIC12.74□□□□□ -0.37
Trim43cP86449 Gm8420-201ENSMUST00000097103 598 ntBASIC12.74□□□□□ -0.37
Trim43cP86449 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Trim43cP86449 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trim43cP86449 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC12.74□□□□□ -0.37
Trim43cP86449 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Trim43cP86449 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trim43cP86449 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim43cP86449 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim43cP86449 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Trim43cP86449 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Trim43cP86449 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trim43cP86449 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim43cP86449 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim43cP86449 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim43cP86449 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim43cP86449 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
Trim43cP86449 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Trim43cP86449 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim43cP86449 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms