Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CiitaP79621 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CiitaP79621 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CiitaP79621 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CiitaP79621 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
CiitaP79621 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CiitaP79621 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CiitaP79621 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC12.71□□□□□ -0.37
CiitaP79621 Pck2-205ENSMUST00000226352 2784 ntBASIC12.71□□□□□ -0.37
CiitaP79621 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CiitaP79621 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CiitaP79621 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CiitaP79621 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC12.71□□□□□ -0.37
CiitaP79621 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
CiitaP79621 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CiitaP79621 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
CiitaP79621 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CiitaP79621 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CiitaP79621 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CiitaP79621 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC12.71□□□□□ -0.37
CiitaP79621 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
CiitaP79621 Gm11700-201ENSMUST00000119409 403 ntBASIC12.71□□□□□ -0.37
CiitaP79621 Gm11667-201ENSMUST00000119828 486 ntBASIC12.71□□□□□ -0.37
CiitaP79621 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC12.71□□□□□ -0.37
CiitaP79621 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC12.71□□□□□ -0.37
CiitaP79621 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC12.71□□□□□ -0.37
CiitaP79621 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CiitaP79621 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
CiitaP79621 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
CiitaP79621 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CiitaP79621 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC12.71□□□□□ -0.37
CiitaP79621 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC12.71□□□□□ -0.37
CiitaP79621 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC12.71□□□□□ -0.37
CiitaP79621 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC12.71□□□□□ -0.37
CiitaP79621 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
CiitaP79621 Gm44980-201ENSMUST00000205826 314 ntBASIC12.71□□□□□ -0.37
CiitaP79621 Gm44551-201ENSMUST00000208804 171 ntBASIC12.71□□□□□ -0.37
CiitaP79621 Gm45550-201ENSMUST00000209380 946 ntBASIC12.71□□□□□ -0.37
CiitaP79621 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC12.71□□□□□ -0.37
CiitaP79621 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CiitaP79621 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CiitaP79621 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
CiitaP79621 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
CiitaP79621 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
CiitaP79621 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
CiitaP79621 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
CiitaP79621 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
CiitaP79621 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
CiitaP79621 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC12.71□□□□□ -0.38
CiitaP79621 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
CiitaP79621 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CiitaP79621 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CiitaP79621 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CiitaP79621 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CiitaP79621 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
CiitaP79621 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
CiitaP79621 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC12.7□□□□□ -0.38
CiitaP79621 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
CiitaP79621 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC12.7□□□□□ -0.38
CiitaP79621 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
CiitaP79621 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CiitaP79621 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
CiitaP79621 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CiitaP79621 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC12.7□□□□□ -0.38
CiitaP79621 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
CiitaP79621 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
CiitaP79621 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
CiitaP79621 Gm16071-201ENSMUST00000119589 793 ntBASIC12.7□□□□□ -0.38
CiitaP79621 Gm14460-201ENSMUST00000121511 639 ntBASIC12.7□□□□□ -0.38
CiitaP79621 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC12.7□□□□□ -0.38
CiitaP79621 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC12.7□□□□□ -0.38
CiitaP79621 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CiitaP79621 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CiitaP79621 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
CiitaP79621 Gm17826-201ENSMUST00000189720 798 ntBASIC12.7□□□□□ -0.38
CiitaP79621 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC12.7□□□□□ -0.38
CiitaP79621 D9Wsu149-201ENSMUST00000214169 594 ntBASIC12.7□□□□□ -0.38
CiitaP79621 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CiitaP79621 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
CiitaP79621 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
CiitaP79621 Gm5879-201ENSMUST00000089501 1209 ntBASIC12.7□□□□□ -0.38
CiitaP79621 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
CiitaP79621 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
CiitaP79621 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
CiitaP79621 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CiitaP79621 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
CiitaP79621 Gm43417-201ENSMUST00000201586 5207 ntBASIC12.7□□□□□ -0.38
CiitaP79621 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CiitaP79621 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CiitaP79621 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
CiitaP79621 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
CiitaP79621 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
CiitaP79621 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
CiitaP79621 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
CiitaP79621 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC12.7□□□□□ -0.38
CiitaP79621 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CiitaP79621 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CiitaP79621 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
CiitaP79621 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CiitaP79621 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 98.6 ms