Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC12.95□□□□□ -0.34
Hmgb1P63158 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hmgb1P63158 AC127597.1-201ENSMUST00000225697 5711 ntBASIC12.95□□□□□ -0.34
Hmgb1P63158 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Hmgb1P63158 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC12.95□□□□□ -0.34
Hmgb1P63158 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hmgb1P63158 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC12.95□□□□□ -0.34
Hmgb1P63158 Slc38a3-203ENSMUST00000177567 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hmgb1P63158 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hmgb1P63158 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hmgb1P63158 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hmgb1P63158 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hmgb1P63158 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hmgb1P63158 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC12.94□□□□□ -0.34
Hmgb1P63158 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hmgb1P63158 Gm19445-201ENSMUST00000193649 2438 ntBASIC12.94□□□□□ -0.34
Hmgb1P63158 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hmgb1P63158 Gm43807-201ENSMUST00000200678 1781 ntBASIC12.94□□□□□ -0.34
Hmgb1P63158 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hmgb1P63158 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hmgb1P63158 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Hmgb1P63158 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hmgb1P63158 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hmgb1P63158 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hmgb1P63158 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Hmgb1P63158 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hmgb1P63158 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Hmgb1P63158 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Hmgb1P63158 Gm26286-201ENSMUST00000104166 134 ntBASIC12.94□□□□□ -0.34
Hmgb1P63158 Gm15004-201ENSMUST00000119192 630 ntBASIC12.94□□□□□ -0.34
Hmgb1P63158 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hmgb1P63158 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hmgb1P63158 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Hmgb1P63158 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Hmgb1P63158 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Hmgb1P63158 Gm43962-201ENSMUST00000203898 190 ntBASIC12.94□□□□□ -0.34
Hmgb1P63158 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC12.94□□□□□ -0.34
Hmgb1P63158 Gm2553-201ENSMUST00000215986 605 ntBASIC12.94□□□□□ -0.34
Hmgb1P63158 Gm8399-201ENSMUST00000082300 1117 ntBASIC12.94□□□□□ -0.34
Hmgb1P63158 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hmgb1P63158 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Hmgb1P63158 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hmgb1P63158 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hmgb1P63158 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hmgb1P63158 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hmgb1P63158 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Hmgb1P63158 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hmgb1P63158 Gm17980-201ENSMUST00000217977 2349 ntBASIC12.94□□□□□ -0.34
Hmgb1P63158 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hmgb1P63158 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hmgb1P63158 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hmgb1P63158 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hmgb1P63158 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hmgb1P63158 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hmgb1P63158 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
Hmgb1P63158 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC12.93□□□□□ -0.34
Hmgb1P63158 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Hmgb1P63158 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Hmgb1P63158 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Hmgb1P63158 Gm45677-201ENSMUST00000209975 1341 ntBASIC12.93□□□□□ -0.34
Hmgb1P63158 Gm16348-202ENSMUST00000146654 2385 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Hmgb1P63158 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hmgb1P63158 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Hmgb1P63158 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Hmgb1P63158 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Hmgb1P63158 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hmgb1P63158 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hmgb1P63158 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hmgb1P63158 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Hmgb1P63158 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hmgb1P63158 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC12.93□□□□□ -0.34
Hmgb1P63158 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Hmgb1P63158 Gm6334-201ENSMUST00000207083 228 ntBASIC12.93□□□□□ -0.34
Hmgb1P63158 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC12.93□□□□□ -0.34
Hmgb1P63158 Gm44651-201ENSMUST00000207343 372 ntBASIC12.93□□□□□ -0.34
Hmgb1P63158 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC12.93□□□□□ -0.34
Hmgb1P63158 AC121960.1-201ENSMUST00000227982 564 ntBASIC12.93□□□□□ -0.34
Hmgb1P63158 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Hmgb1P63158 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Hmgb1P63158 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hmgb1P63158 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Hmgb1P63158 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hmgb1P63158 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Hmgb1P63158 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Hmgb1P63158 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Hmgb1P63158 Gm21136-201ENSMUST00000186812 2575 ntBASIC12.93□□□□□ -0.34
Hmgb1P63158 AC123619.2-202ENSMUST00000225097 1568 ntBASIC12.93□□□□□ -0.34
Hmgb1P63158 Kif2c-202ENSMUST00000106436 2378 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Hmgb1P63158 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC12.93□□□□□ -0.34
Hmgb1P63158 Tmem130-201ENSMUST00000061446 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hmgb1P63158 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hmgb1P63158 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hmgb1P63158 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hmgb1P63158 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hmgb1P63158 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hmgb1P63158 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Hmgb1P63158 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hmgb1P63158 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hmgb1P63158 Gm8862-201ENSMUST00000198379 1346 ntBASIC12.92□□□□□ -0.34
Hmgb1P63158 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms