Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Ybx1P62960 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC12.02□□□□□ -0.49
Ybx1P62960 AC122860.2-201ENSMUST00000217967 2671 ntBASIC12.02□□□□□ -0.49
Ybx1P62960 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ybx1P62960 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ybx1P62960 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ybx1P62960 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ybx1P62960 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Ybx1P62960 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC12.02□□□□□ -0.49
Ybx1P62960 Gm15507-201ENSMUST00000133523 592 ntTSL 5 BASIC12.02□□□□□ -0.49
Ybx1P62960 Gm17798-201ENSMUST00000182282 1035 ntBASIC12.02□□□□□ -0.49
Ybx1P62960 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC12.02□□□□□ -0.49
Ybx1P62960 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC12.02□□□□□ -0.49
Ybx1P62960 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC12.02□□□□□ -0.49
Ybx1P62960 2310074N15Rik-201ENSMUST00000198276 582 ntBASIC12.02□□□□□ -0.49
Ybx1P62960 4930405N21Rik-201ENSMUST00000199950 1200 ntBASIC12.02□□□□□ -0.49
Ybx1P62960 Gm6108-201ENSMUST00000208365 367 ntBASIC12.02□□□□□ -0.49
Ybx1P62960 Gm45120-201ENSMUST00000208880 408 ntBASIC12.02□□□□□ -0.49
Ybx1P62960 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ybx1P62960 Gm3619-201ENSMUST00000219947 775 ntBASIC12.02□□□□□ -0.49
Ybx1P62960 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ybx1P62960 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Ybx1P62960 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ybx1P62960 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ybx1P62960 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ybx1P62960 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ybx1P62960 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ybx1P62960 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ybx1P62960 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ybx1P62960 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Ybx1P62960 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ybx1P62960 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ybx1P62960 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Ybx1P62960 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ybx1P62960 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC12.02□□□□□ -0.49
Ybx1P62960 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ybx1P62960 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ybx1P62960 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC12.01□□□□□ -0.49
Ybx1P62960 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ybx1P62960 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC12.01□□□□□ -0.49
Ybx1P62960 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Ybx1P62960 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ybx1P62960 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Ybx1P62960 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ybx1P62960 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ybx1P62960 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ybx1P62960 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ybx1P62960 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Ybx1P62960 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ybx1P62960 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.01□□□□□ -0.49
Ybx1P62960 Gm14132-201ENSMUST00000117188 1719 ntBASIC12.01□□□□□ -0.49
Ybx1P62960 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
Ybx1P62960 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ybx1P62960 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Ybx1P62960 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Ybx1P62960 Gm25063-201ENSMUST00000104666 94 ntBASIC12.01□□□□□ -0.49
Ybx1P62960 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC12.01□□□□□ -0.49
Ybx1P62960 E130307A14Rik-203ENSMUST00000136862 608 ntTSL 3 BASIC12.01□□□□□ -0.49
Ybx1P62960 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ybx1P62960 Gm22442-201ENSMUST00000157256 144 ntBASIC12.01□□□□□ -0.49
Ybx1P62960 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Ybx1P62960 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC12.01□□□□□ -0.49
Ybx1P62960 Mir6407-201ENSMUST00000184510 101 ntBASIC12.01□□□□□ -0.49
Ybx1P62960 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC12.01□□□□□ -0.49
Ybx1P62960 Gm9136-201ENSMUST00000193368 454 ntBASIC12.01□□□□□ -0.49
Ybx1P62960 AC136376.2-201ENSMUST00000228819 490 ntBASIC12.01□□□□□ -0.49
Ybx1P62960 Them5-201ENSMUST00000029794 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ybx1P62960 Mgp-201ENSMUST00000032342 617 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ybx1P62960 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ybx1P62960 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Ybx1P62960 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC12.01□□□□□ -0.49
Ybx1P62960 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ybx1P62960 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ybx1P62960 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ybx1P62960 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC12.01□□□□□ -0.49
Ybx1P62960 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ybx1P62960 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
Ybx1P62960 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ybx1P62960 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ybx1P62960 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ybx1P62960 AC157950.1-201ENSMUST00000217561 2168 ntBASIC12.01□□□□□ -0.49
Ybx1P62960 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ybx1P62960 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ybx1P62960 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ybx1P62960 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ybx1P62960 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ybx1P62960 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ybx1P62960 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Ybx1P62960 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Ybx1P62960 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ybx1P62960 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ybx1P62960 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ybx1P62960 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Ybx1P62960 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC12□□□□□ -0.49
Ybx1P62960 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ybx1P62960 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Ybx1P62960 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ybx1P62960 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ybx1P62960 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ybx1P62960 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 114 ms