Protein–RNA interactions for Protein: P56183

Rrp1, Ribosomal RNA processing protein 1 homolog A, mousemouse

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1P56183 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rrp1P56183 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Rrp1P56183 Gm11511-201ENSMUST00000118146 540 ntBASIC13.21□□□□□ -0.29
Rrp1P56183 Gm15004-201ENSMUST00000119192 630 ntBASIC13.21□□□□□ -0.29
Rrp1P56183 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC13.21□□□□□ -0.29
Rrp1P56183 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC13.21□□□□□ -0.29
Rrp1P56183 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Rrp1P56183 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Rrp1P56183 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC13.21□□□□□ -0.29
Rrp1P56183 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rrp1P56183 Gm43822-201ENSMUST00000200285 476 ntBASIC13.21□□□□□ -0.29
Rrp1P56183 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Rrp1P56183 Olfr284-202ENSMUST00000206647 966 ntBASIC13.21□□□□□ -0.29
Rrp1P56183 Gm9368-201ENSMUST00000219348 831 ntBASIC13.21□□□□□ -0.29
Rrp1P56183 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rrp1P56183 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC13.21□□□□□ -0.29
Rrp1P56183 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC13.21□□□□□ -0.29
Rrp1P56183 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Rrp1P56183 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC13.21□□□□□ -0.29
Rrp1P56183 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rrp1P56183 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rrp1P56183 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Rrp1P56183 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Rrp1P56183 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC13.21□□□□□ -0.3
Rrp1P56183 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
Rrp1P56183 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Rrp1P56183 Gm43522-201ENSMUST00000196697 1922 ntBASIC13.21□□□□□ -0.3
Rrp1P56183 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rrp1P56183 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rrp1P56183 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rrp1P56183 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rrp1P56183 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rrp1P56183 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Rrp1P56183 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC13.2□□□□□ -0.3
Rrp1P56183 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Rrp1P56183 AC126444.1-201ENSMUST00000225938 1768 ntBASIC13.2□□□□□ -0.3
Rrp1P56183 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Rrp1P56183 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rrp1P56183 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
Rrp1P56183 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rrp1P56183 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
Rrp1P56183 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rrp1P56183 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rrp1P56183 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rrp1P56183 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rrp1P56183 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rrp1P56183 Gm15370-201ENSMUST00000117158 253 ntBASIC13.2□□□□□ -0.3
Rrp1P56183 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Rrp1P56183 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Rrp1P56183 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Rrp1P56183 Gm26956-201ENSMUST00000182176 986 ntBASIC13.2□□□□□ -0.3
Rrp1P56183 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC13.2□□□□□ -0.3
Rrp1P56183 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rrp1P56183 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rrp1P56183 Gm5455-201ENSMUST00000058710 715 ntBASIC13.2□□□□□ -0.3
Rrp1P56183 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rrp1P56183 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rrp1P56183 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC13.2□□□□□ -0.3
Rrp1P56183 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rrp1P56183 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rrp1P56183 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Rrp1P56183 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rrp1P56183 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rrp1P56183 Gm13347-201ENSMUST00000120298 1353 ntBASIC13.2□□□□□ -0.3
Rrp1P56183 AC091458.1-201ENSMUST00000220902 1361 ntBASIC13.2□□□□□ -0.3
Rrp1P56183 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rrp1P56183 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Rrp1P56183 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rrp1P56183 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rrp1P56183 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Rrp1P56183 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Rrp1P56183 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rrp1P56183 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rrp1P56183 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rrp1P56183 Gm38140-201ENSMUST00000193617 2755 ntBASIC13.19□□□□□ -0.3
Rrp1P56183 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rrp1P56183 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rrp1P56183 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Rrp1P56183 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rrp1P56183 Gm15547-201ENSMUST00000122152 333 ntBASIC13.19□□□□□ -0.3
Rrp1P56183 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC13.19□□□□□ -0.3
Rrp1P56183 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC13.19□□□□□ -0.3
Rrp1P56183 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC13.19□□□□□ -0.3
Rrp1P56183 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC13.19□□□□□ -0.3
Rrp1P56183 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC13.19□□□□□ -0.3
Rrp1P56183 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC13.19□□□□□ -0.3
Rrp1P56183 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rrp1P56183 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC13.19□□□□□ -0.3
Rrp1P56183 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC13.19□□□□□ -0.3
Rrp1P56183 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC13.19□□□□□ -0.3
Rrp1P56183 Gm38319-201ENSMUST00000194537 1266 ntBASIC13.19□□□□□ -0.3
Rrp1P56183 Gm44364-201ENSMUST00000198368 141 ntBASIC13.19□□□□□ -0.3
Rrp1P56183 Gm3961-201ENSMUST00000204425 994 ntBASIC13.19□□□□□ -0.3
Rrp1P56183 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rrp1P56183 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rrp1P56183 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rrp1P56183 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rrp1P56183 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rrp1P56183 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rrp1P56183 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 57.4 ms