Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Msh6P54276 Fyn-207ENSMUST00000146287 2135 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Msh6P54276 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Msh6P54276 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Msh6P54276 Gm43334-201ENSMUST00000197740 1318 ntBASIC14.8□□□□□ -0.04
Msh6P54276 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Msh6P54276 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Msh6P54276 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Msh6P54276 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Msh6P54276 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Msh6P54276 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Msh6P54276 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Msh6P54276 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Msh6P54276 Gm5257-201ENSMUST00000121823 790 ntBASIC14.8□□□□□ -0.04
Msh6P54276 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Msh6P54276 BC016548-202ENSMUST00000153797 805 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Msh6P54276 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Msh6P54276 Gm16553-201ENSMUST00000160490 716 ntTSL 3 BASIC14.8□□□□□ -0.04
Msh6P54276 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Msh6P54276 Gm37826-201ENSMUST00000195329 322 ntBASIC14.8□□□□□ -0.04
Msh6P54276 Gm39288-201ENSMUST00000210554 446 ntBASIC14.8□□□□□ -0.04
Msh6P54276 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC14.8□□□□□ -0.04
Msh6P54276 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC14.8□□□□□ -0.04
Msh6P54276 Gm10263-201ENSMUST00000085163 300 ntBASIC14.8□□□□□ -0.04
Msh6P54276 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Msh6P54276 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Msh6P54276 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Msh6P54276 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Msh6P54276 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Msh6P54276 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Msh6P54276 Gm43172-201ENSMUST00000202139 2137 ntBASIC14.79□□□□□ -0.04
Msh6P54276 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Msh6P54276 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC14.79□□□□□ -0.04
Msh6P54276 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Msh6P54276 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Msh6P54276 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Msh6P54276 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Msh6P54276 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Msh6P54276 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Msh6P54276 Smim11-202ENSMUST00000118064 782 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
Msh6P54276 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC14.79□□□□□ -0.04
Msh6P54276 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC14.79□□□□□ -0.04
Msh6P54276 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
Msh6P54276 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC14.79□□□□□ -0.04
Msh6P54276 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
Msh6P54276 Znhit6-206ENSMUST00000199033 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Msh6P54276 Gm43912-201ENSMUST00000204352 538 ntBASIC14.79□□□□□ -0.04
Msh6P54276 2010109P13Rik-201ENSMUST00000204605 392 ntBASIC14.79□□□□□ -0.04
Msh6P54276 Cdipt-204ENSMUST00000206346 806 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Msh6P54276 Mt1-202ENSMUST00000211807 1085 ntBASIC14.79□□□□□ -0.04
Msh6P54276 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
Msh6P54276 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC14.79□□□□□ -0.04
Msh6P54276 CT573047.1-201ENSMUST00000223652 851 ntBASIC14.79□□□□□ -0.04
Msh6P54276 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Msh6P54276 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Msh6P54276 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC14.79□□□□□ -0.04
Msh6P54276 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Msh6P54276 Llph-201ENSMUST00000020444 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Msh6P54276 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC14.79□□□□□ -0.04
Msh6P54276 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Msh6P54276 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
Msh6P54276 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Msh6P54276 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Msh6P54276 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Msh6P54276 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Msh6P54276 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Msh6P54276 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Msh6P54276 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Msh6P54276 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Msh6P54276 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Msh6P54276 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Msh6P54276 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Msh6P54276 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Msh6P54276 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Msh6P54276 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Msh6P54276 Gm25053-201ENSMUST00000103982 133 ntBASIC14.78□□□□□ -0.04
Msh6P54276 Gm25922-201ENSMUST00000104281 130 ntBASIC14.78□□□□□ -0.04
Msh6P54276 Gm14071-201ENSMUST00000117817 509 ntBASIC14.78□□□□□ -0.04
Msh6P54276 Gm21987-201ENSMUST00000119704 456 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Msh6P54276 Gm14395-201ENSMUST00000120494 563 ntBASIC14.78□□□□□ -0.04
Msh6P54276 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC14.78□□□□□ -0.04
Msh6P54276 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC14.78□□□□□ -0.04
Msh6P54276 Gm24679-201ENSMUST00000158762 111 ntBASIC14.78□□□□□ -0.04
Msh6P54276 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Msh6P54276 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC14.78□□□□□ -0.04
Msh6P54276 Anapc16-203ENSMUST00000182152 847 ntTSL 2 BASIC14.78□□□□□ -0.04
Msh6P54276 Gm19015-201ENSMUST00000184002 1189 ntBASIC14.78□□□□□ -0.04
Msh6P54276 Gm25053-202ENSMUST00000199731 132 ntBASIC14.78□□□□□ -0.04
Msh6P54276 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Msh6P54276 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Msh6P54276 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Msh6P54276 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Msh6P54276 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
Msh6P54276 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Msh6P54276 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Msh6P54276 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Msh6P54276 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Msh6P54276 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
Msh6P54276 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Msh6P54276 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms