Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Gm14234-201ENSMUST00000119539 845 ntBASIC17.76■□□□□ 0.43
Cux1P53564 Gm13981-201ENSMUST00000122360 447 ntBASIC17.76■□□□□ 0.43
Cux1P53564 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Cux1P53564 Gm3329-201ENSMUST00000159873 556 ntBASIC17.76■□□□□ 0.43
Cux1P53564 Gm16167-201ENSMUST00000160428 1065 ntBASIC17.76■□□□□ 0.43
Cux1P53564 Gm13290-201ENSMUST00000177806 968 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Cux1P53564 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Cux1P53564 AC170997.1-201ENSMUST00000214554 1053 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Cux1P53564 Gsto1-201ENSMUST00000026050 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cux1P53564 Try5-201ENSMUST00000064324 801 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cux1P53564 Olfr314-201ENSMUST00000076393 1131 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Cux1P53564 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Cux1P53564 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cux1P53564 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cux1P53564 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cux1P53564 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cux1P53564 A230009B12Rik-202ENSMUST00000159602 1810 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Cux1P53564 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cux1P53564 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC17.76■□□□□ 0.43
Cux1P53564 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Cux1P53564 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cux1P53564 9430015G10Rik-202ENSMUST00000105576 1329 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Cux1P53564 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cux1P53564 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Cux1P53564 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC17.75■□□□□ 0.43
Cux1P53564 Brcc3-203ENSMUST00000118428 2093 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Cux1P53564 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cux1P53564 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cux1P53564 Fbp2-201ENSMUST00000021907 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cux1P53564 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Cux1P53564 Gm26632-201ENSMUST00000181120 1400 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Cux1P53564 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Cux1P53564 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cux1P53564 Gm45416-201ENSMUST00000209713 2201 ntBASIC17.75■□□□□ 0.43
Cux1P53564 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cux1P53564 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC17.75■□□□□ 0.43
Cux1P53564 Gm22594-201ENSMUST00000104251 130 ntBASIC17.75■□□□□ 0.43
Cux1P53564 Art5-202ENSMUST00000106934 843 ntTSL 5 BASIC17.75■□□□□ 0.43
Cux1P53564 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Cux1P53564 Gm12129-201ENSMUST00000120104 1147 ntBASIC17.75■□□□□ 0.43
Cux1P53564 Gm17221-201ENSMUST00000163909 481 ntBASIC17.75■□□□□ 0.43
Cux1P53564 Mrto4-ps2-201ENSMUST00000164169 549 ntBASIC17.75■□□□□ 0.43
Cux1P53564 Gm17073-201ENSMUST00000168069 556 ntBASIC17.75■□□□□ 0.43
Cux1P53564 Gm8451-201ENSMUST00000170338 447 ntBASIC17.75■□□□□ 0.43
Cux1P53564 Gm25677-201ENSMUST00000174983 72 ntBASIC17.75■□□□□ 0.43
Cux1P53564 Gm27956-201ENSMUST00000175604 260 ntBASIC17.75■□□□□ 0.43
Cux1P53564 Gm5294-201ENSMUST00000179205 651 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Cux1P53564 Gm43969-201ENSMUST00000204833 535 ntBASIC17.75■□□□□ 0.43
Cux1P53564 Klk1b15-ps-201ENSMUST00000206273 715 ntBASIC17.75■□□□□ 0.43
Cux1P53564 Gm45135-201ENSMUST00000206787 1184 ntBASIC17.75■□□□□ 0.43
Cux1P53564 Gm8255-201ENSMUST00000218693 305 ntBASIC17.75■□□□□ 0.43
Cux1P53564 Olfr335-ps-201ENSMUST00000223545 939 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Cux1P53564 Crygf-201ENSMUST00000027082 627 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cux1P53564 Gm7536-201ENSMUST00000077389 444 ntBASIC17.75■□□□□ 0.43
Cux1P53564 Gm5453-201ENSMUST00000080866 447 ntBASIC17.75■□□□□ 0.43
Cux1P53564 Hist1h2bl-201ENSMUST00000091756 381 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Cux1P53564 D430013B06Rik-201ENSMUST00000192922 1872 ntBASIC17.75■□□□□ 0.43
Cux1P53564 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Cux1P53564 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cux1P53564 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Cux1P53564 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Cux1P53564 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cux1P53564 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cux1P53564 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cux1P53564 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cux1P53564 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cux1P53564 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cux1P53564 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cux1P53564 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Cux1P53564 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Cux1P53564 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cux1P53564 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cux1P53564 AC156031.2-201ENSMUST00000213107 3310 ntBASIC17.74■□□□□ 0.43
Cux1P53564 Gm13039-201ENSMUST00000118638 794 ntBASIC17.74■□□□□ 0.43
Cux1P53564 4933417D19Rik-201ENSMUST00000181432 1229 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Cux1P53564 Zfp655-203ENSMUST00000196069 1150 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Cux1P53564 Gm31520-203ENSMUST00000204874 647 ntTSL 3 BASIC17.74■□□□□ 0.43
Cux1P53564 Krtap12-1-201ENSMUST00000092370 656 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Cux1P53564 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cux1P53564 Aldoa-201ENSMUST00000032934 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cux1P53564 Eid3-201ENSMUST00000211623 1305 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Cux1P53564 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cux1P53564 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cux1P53564 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Cux1P53564 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Cux1P53564 Acnat2-202ENSMUST00000107698 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cux1P53564 Gm43364-201ENSMUST00000196046 3274 ntBASIC17.74■□□□□ 0.43
Cux1P53564 Npl-201ENSMUST00000041874 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cux1P53564 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cux1P53564 Gm37014-201ENSMUST00000194723 2253 ntBASIC17.74■□□□□ 0.43
Cux1P53564 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Cux1P53564 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Cux1P53564 Gm43102-201ENSMUST00000201004 2324 ntBASIC17.73■□□□□ 0.43
Cux1P53564 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Cux1P53564 Cisd3-203ENSMUST00000107585 586 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cux1P53564 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cux1P53564 Gm14993-201ENSMUST00000121180 164 ntBASIC17.73■□□□□ 0.43
Cux1P53564 Gm11634-201ENSMUST00000154147 755 ntAPPRIS ALT2 TSL 3 BASIC17.73■□□□□ 0.43
Cux1P53564 Mrip-ps-201ENSMUST00000184613 940 ntBASIC17.73■□□□□ 0.43
Cux1P53564 AC122860.1-201ENSMUST00000217669 773 ntTSL 3 BASIC17.73■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 102 ms