Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vps4bP46467 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vps4bP46467 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Vps4bP46467 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC11.91□□□□□ -0.5
Vps4bP46467 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC11.91□□□□□ -0.5
Vps4bP46467 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Vps4bP46467 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vps4bP46467 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vps4bP46467 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vps4bP46467 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vps4bP46467 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC11.91□□□□□ -0.5
Vps4bP46467 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vps4bP46467 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vps4bP46467 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC11.91□□□□□ -0.5
Vps4bP46467 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC11.91□□□□□ -0.5
Vps4bP46467 Gm11660-201ENSMUST00000120955 412 ntBASIC11.91□□□□□ -0.5
Vps4bP46467 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vps4bP46467 Gm9034-201ENSMUST00000182071 1005 ntBASIC11.91□□□□□ -0.5
Vps4bP46467 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Vps4bP46467 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC11.91□□□□□ -0.5
Vps4bP46467 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Vps4bP46467 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC11.91□□□□□ -0.5
Vps4bP46467 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Vps4bP46467 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC11.91□□□□□ -0.5
Vps4bP46467 Gzmn-202ENSMUST00000225535 989 ntBASIC11.91□□□□□ -0.5
Vps4bP46467 AC161537.1-201ENSMUST00000226199 1015 ntBASIC11.91□□□□□ -0.5
Vps4bP46467 Gm5455-201ENSMUST00000058710 715 ntBASIC11.91□□□□□ -0.5
Vps4bP46467 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vps4bP46467 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vps4bP46467 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vps4bP46467 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Vps4bP46467 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Vps4bP46467 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vps4bP46467 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Vps4bP46467 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vps4bP46467 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vps4bP46467 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vps4bP46467 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Vps4bP46467 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vps4bP46467 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Vps4bP46467 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Vps4bP46467 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Vps4bP46467 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC11.9□□□□□ -0.5
Vps4bP46467 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Vps4bP46467 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC11.9□□□□□ -0.5
Vps4bP46467 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Vps4bP46467 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Vps4bP46467 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Vps4bP46467 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Vps4bP46467 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Vps4bP46467 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Vps4bP46467 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Vps4bP46467 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Vps4bP46467 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Vps4bP46467 Gm12176-201ENSMUST00000121420 875 ntBASIC11.9□□□□□ -0.5
Vps4bP46467 Gm11960-201ENSMUST00000122068 925 ntBASIC11.9□□□□□ -0.5
Vps4bP46467 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Vps4bP46467 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC11.9□□□□□ -0.5
Vps4bP46467 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC11.9□□□□□ -0.5
Vps4bP46467 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC11.9□□□□□ -0.5
Vps4bP46467 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC11.9□□□□□ -0.5
Vps4bP46467 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Vps4bP46467 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Vps4bP46467 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Vps4bP46467 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Vps4bP46467 Gm8885-201ENSMUST00000189382 598 ntBASIC11.9□□□□□ -0.5
Vps4bP46467 Gm32999-201ENSMUST00000192693 562 ntBASIC11.9□□□□□ -0.5
Vps4bP46467 Gm38314-201ENSMUST00000195709 625 ntBASIC11.9□□□□□ -0.5
Vps4bP46467 Rprl1-202ENSMUST00000198476 238 ntBASIC11.9□□□□□ -0.5
Vps4bP46467 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Vps4bP46467 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC11.9□□□□□ -0.5
Vps4bP46467 Gm2553-201ENSMUST00000215986 605 ntBASIC11.9□□□□□ -0.5
Vps4bP46467 AC153954.1-201ENSMUST00000216959 255 ntBASIC11.9□□□□□ -0.5
Vps4bP46467 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Vps4bP46467 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Vps4bP46467 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Vps4bP46467 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Vps4bP46467 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Vps4bP46467 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC11.9□□□□□ -0.5
Vps4bP46467 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Vps4bP46467 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Vps4bP46467 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Vps4bP46467 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Vps4bP46467 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Vps4bP46467 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC11.9□□□□□ -0.51
Vps4bP46467 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Vps4bP46467 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Vps4bP46467 Gm45677-201ENSMUST00000209975 1341 ntBASIC11.89□□□□□ -0.51
Vps4bP46467 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC11.89□□□□□ -0.51
Vps4bP46467 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Vps4bP46467 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Vps4bP46467 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC11.89□□□□□ -0.51
Vps4bP46467 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Vps4bP46467 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC11.89□□□□□ -0.51
Vps4bP46467 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Vps4bP46467 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Vps4bP46467 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Vps4bP46467 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Vps4bP46467 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Vps4bP46467 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC11.89□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms