Protein–RNA interactions for Protein: P41272

Cd27, CD27 antigen, mousemouse

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd27P41272 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Cd27P41272 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cd27P41272 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cd27P41272 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cd27P41272 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cd27P41272 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Cd27P41272 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC9.44□□□□□ -0.9
Cd27P41272 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cd27P41272 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cd27P41272 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cd27P41272 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
Cd27P41272 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cd27P41272 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cd27P41272 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Cd27P41272 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC9.43□□□□□ -0.9
Cd27P41272 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Cd27P41272 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Cd27P41272 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Cd27P41272 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Cd27P41272 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Cd27P41272 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Cd27P41272 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Cd27P41272 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC9.43□□□□□ -0.9
Cd27P41272 Ddah1-202ENSMUST00000120310 2291 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Cd27P41272 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Cd27P41272 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC9.43□□□□□ -0.9
Cd27P41272 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Cd27P41272 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Cd27P41272 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC9.43□□□□□ -0.9
Cd27P41272 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Cd27P41272 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Cd27P41272 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC9.43□□□□□ -0.9
Cd27P41272 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Cd27P41272 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC9.43□□□□□ -0.9
Cd27P41272 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC9.43□□□□□ -0.9
Cd27P41272 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Cd27P41272 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Cd27P41272 Gm14058-201ENSMUST00000116082 735 ntBASIC9.43□□□□□ -0.9
Cd27P41272 Gm6506-201ENSMUST00000119775 1136 ntBASIC9.43□□□□□ -0.9
Cd27P41272 Gm15595-201ENSMUST00000120840 961 ntBASIC9.43□□□□□ -0.9
Cd27P41272 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Cd27P41272 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Cd27P41272 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC9.43□□□□□ -0.9
Cd27P41272 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Cd27P41272 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC9.43□□□□□ -0.9
Cd27P41272 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Cd27P41272 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC9.43□□□□□ -0.9
Cd27P41272 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Cd27P41272 Gm37986-201ENSMUST00000193285 383 ntBASIC9.43□□□□□ -0.9
Cd27P41272 Gm5982-201ENSMUST00000196234 512 ntBASIC9.43□□□□□ -0.9
Cd27P41272 Gm2965-201ENSMUST00000198365 343 ntBASIC9.43□□□□□ -0.9
Cd27P41272 Gm44136-201ENSMUST00000203819 1106 ntBASIC9.43□□□□□ -0.9
Cd27P41272 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC9.43□□□□□ -0.9
Cd27P41272 Gm2553-201ENSMUST00000215986 605 ntBASIC9.43□□□□□ -0.9
Cd27P41272 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC9.43□□□□□ -0.9
Cd27P41272 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Cd27P41272 Gm9785-201ENSMUST00000062642 1006 ntBASIC9.43□□□□□ -0.9
Cd27P41272 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Cd27P41272 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Cd27P41272 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Cd27P41272 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC9.43□□□□□ -0.9
Cd27P41272 Crebrf-203ENSMUST00000142539 2674 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Cd27P41272 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC9.43□□□□□ -0.9
Cd27P41272 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Cd27P41272 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Cd27P41272 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Cd27P41272 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC9.43□□□□□ -0.9
Cd27P41272 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Cd27P41272 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Cd27P41272 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Cd27P41272 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Cd27P41272 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Cd27P41272 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Cd27P41272 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Cd27P41272 AC166359.1-201ENSMUST00000220243 1871 ntBASIC9.42□□□□□ -0.9
Cd27P41272 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC9.42□□□□□ -0.9
Cd27P41272 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cd27P41272 Surf6-201ENSMUST00000047632 2971 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cd27P41272 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cd27P41272 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cd27P41272 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cd27P41272 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Cd27P41272 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
Cd27P41272 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cd27P41272 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cd27P41272 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cd27P41272 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Cd27P41272 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cd27P41272 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cd27P41272 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cd27P41272 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cd27P41272 Il33-202ENSMUST00000120388 2537 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cd27P41272 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cd27P41272 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC9.42□□□□□ -0.9
Cd27P41272 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Cd27P41272 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Cd27P41272 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Cd27P41272 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Cd27P41272 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cd27P41272 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms