Protein–RNA interactions for Protein: P40240

Cd9, CD9 antigen, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd9P40240 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Cd9P40240 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC11.57□□□□□ -0.56
Cd9P40240 Gm18734-201ENSMUST00000172937 808 ntBASIC11.57□□□□□ -0.56
Cd9P40240 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Cd9P40240 Gm27530-201ENSMUST00000184096 98 ntBASIC11.57□□□□□ -0.56
Cd9P40240 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC11.57□□□□□ -0.56
Cd9P40240 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Cd9P40240 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cd9P40240 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cd9P40240 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Cd9P40240 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Cd9P40240 Il33-202ENSMUST00000120388 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cd9P40240 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Cd9P40240 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cd9P40240 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Cd9P40240 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Cd9P40240 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cd9P40240 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Cd9P40240 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Cd9P40240 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Cd9P40240 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cd9P40240 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Cd9P40240 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cd9P40240 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Cd9P40240 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cd9P40240 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cd9P40240 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cd9P40240 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Cd9P40240 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cd9P40240 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cd9P40240 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cd9P40240 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cd9P40240 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Cd9P40240 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cd9P40240 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Cd9P40240 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cd9P40240 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Cd9P40240 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC11.56□□□□□ -0.56
Cd9P40240 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Cd9P40240 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC11.56□□□□□ -0.56
Cd9P40240 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC11.56□□□□□ -0.56
Cd9P40240 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC11.56□□□□□ -0.56
Cd9P40240 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC11.56□□□□□ -0.56
Cd9P40240 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Cd9P40240 AU022133-201ENSMUST00000200601 873 ntBASIC11.56□□□□□ -0.56
Cd9P40240 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Cd9P40240 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC11.56□□□□□ -0.56
Cd9P40240 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC11.56□□□□□ -0.56
Cd9P40240 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC11.56□□□□□ -0.56
Cd9P40240 CT009713.8-202ENSMUST00000224732 385 ntBASIC11.56□□□□□ -0.56
Cd9P40240 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cd9P40240 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cd9P40240 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cd9P40240 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cd9P40240 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Cd9P40240 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Cd9P40240 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cd9P40240 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cd9P40240 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC11.56□□□□□ -0.56
Cd9P40240 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cd9P40240 Gm43860-201ENSMUST00000201742 2705 ntBASIC11.56□□□□□ -0.56
Cd9P40240 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cd9P40240 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
Cd9P40240 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cd9P40240 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC11.56□□□□□ -0.56
Cd9P40240 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cd9P40240 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
Cd9P40240 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cd9P40240 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cd9P40240 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC11.55□□□□□ -0.56
Cd9P40240 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cd9P40240 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC11.55□□□□□ -0.56
Cd9P40240 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cd9P40240 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cd9P40240 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cd9P40240 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cd9P40240 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cd9P40240 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cd9P40240 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cd9P40240 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cd9P40240 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Cd9P40240 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC11.55□□□□□ -0.56
Cd9P40240 Gm14208-201ENSMUST00000119645 678 ntBASIC11.55□□□□□ -0.56
Cd9P40240 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC11.55□□□□□ -0.56
Cd9P40240 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC11.55□□□□□ -0.56
Cd9P40240 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Cd9P40240 Gm8459-201ENSMUST00000162504 760 ntBASIC11.55□□□□□ -0.56
Cd9P40240 Gm20495-201ENSMUST00000173902 235 ntBASIC11.55□□□□□ -0.56
Cd9P40240 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC11.55□□□□□ -0.56
Cd9P40240 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC11.55□□□□□ -0.56
Cd9P40240 AC122891.1-201ENSMUST00000218671 268 ntBASIC11.55□□□□□ -0.56
Cd9P40240 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC11.55□□□□□ -0.56
Cd9P40240 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC11.55□□□□□ -0.56
Cd9P40240 AC164437.3-201ENSMUST00000228323 347 ntBASIC11.55□□□□□ -0.56
Cd9P40240 Gm10288-201ENSMUST00000084614 537 ntBASIC11.55□□□□□ -0.56
Cd9P40240 CT010447.1-201ENSMUST00000225657 1608 ntBASIC11.55□□□□□ -0.56
Cd9P40240 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC11.55□□□□□ -0.56
Cd9P40240 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cd9P40240 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Cd9P40240 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 81.2 ms