Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cxcl12P40224 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cxcl12P40224 Gm13094-201ENSMUST00000117930 409 ntBASIC12.05□□□□□ -0.48
Cxcl12P40224 Apoc3-202ENSMUST00000118649 453 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Cxcl12P40224 Gm11205-201ENSMUST00000137738 431 ntTSL 5 BASIC12.05□□□□□ -0.48
Cxcl12P40224 Pfdn5-203ENSMUST00000165671 830 ntTSL 2 BASIC12.05□□□□□ -0.48
Cxcl12P40224 Scgb2b7-201ENSMUST00000178258 520 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cxcl12P40224 Gm24954-201ENSMUST00000178831 110 ntBASIC12.05□□□□□ -0.48
Cxcl12P40224 Gm9625-201ENSMUST00000180422 955 ntBASIC12.05□□□□□ -0.48
Cxcl12P40224 Gm6114-201ENSMUST00000182472 968 ntBASIC12.05□□□□□ -0.48
Cxcl12P40224 Gm7985-201ENSMUST00000183329 981 ntBASIC12.05□□□□□ -0.48
Cxcl12P40224 Mir6953-201ENSMUST00000184745 68 ntBASIC12.05□□□□□ -0.48
Cxcl12P40224 Gm37197-201ENSMUST00000195607 401 ntBASIC12.05□□□□□ -0.48
Cxcl12P40224 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC12.05□□□□□ -0.48
Cxcl12P40224 Chn2-210ENSMUST00000203091 755 ntTSL 5 BASIC12.05□□□□□ -0.48
Cxcl12P40224 Gm45481-201ENSMUST00000209717 877 ntBASIC12.05□□□□□ -0.48
Cxcl12P40224 Gm9487-201ENSMUST00000216600 472 ntBASIC12.05□□□□□ -0.48
Cxcl12P40224 CT025689.1-201ENSMUST00000225214 283 ntBASIC12.05□□□□□ -0.48
Cxcl12P40224 Capsl-202ENSMUST00000226688 739 ntBASIC12.05□□□□□ -0.48
Cxcl12P40224 Gm9758-201ENSMUST00000035980 1167 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cxcl12P40224 4930572O03Rik-201ENSMUST00000092696 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cxcl12P40224 4631405J19Rik-201ENSMUST00000099699 1225 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Cxcl12P40224 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Cxcl12P40224 Gapdhs-203ENSMUST00000182634 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cxcl12P40224 Smok4a-201ENSMUST00000074512 1455 ntBASIC12.05□□□□□ -0.48
Cxcl12P40224 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Cxcl12P40224 D430013B06Rik-201ENSMUST00000192922 1872 ntBASIC12.05□□□□□ -0.48
Cxcl12P40224 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Cxcl12P40224 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Cxcl12P40224 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cxcl12P40224 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cxcl12P40224 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cxcl12P40224 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cxcl12P40224 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cxcl12P40224 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Cxcl12P40224 Mapk1ip1-201ENSMUST00000075667 1502 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cxcl12P40224 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cxcl12P40224 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Cxcl12P40224 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cxcl12P40224 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC12.05□□□□□ -0.48
Cxcl12P40224 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cxcl12P40224 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Cxcl12P40224 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cxcl12P40224 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cxcl12P40224 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Cxcl12P40224 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cxcl12P40224 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cxcl12P40224 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Cxcl12P40224 Fbxo15-201ENSMUST00000037718 1437 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cxcl12P40224 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Cxcl12P40224 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cxcl12P40224 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cxcl12P40224 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Cxcl12P40224 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cxcl12P40224 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC12.04□□□□□ -0.48
Cxcl12P40224 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Cxcl12P40224 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Cxcl12P40224 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
Cxcl12P40224 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cxcl12P40224 Gm45638-201ENSMUST00000211507 2878 ntBASIC12.04□□□□□ -0.48
Cxcl12P40224 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cxcl12P40224 1700011M02Rik-201ENSMUST00000113602 420 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cxcl12P40224 Gm9166-201ENSMUST00000120293 561 ntBASIC12.04□□□□□ -0.48
Cxcl12P40224 Tnfrsf14-201ENSMUST00000123514 1018 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cxcl12P40224 Gm14255-201ENSMUST00000128846 248 ntTSL 5 BASIC12.04□□□□□ -0.48
Cxcl12P40224 Mir432-201ENSMUST00000157230 75 ntBASIC12.04□□□□□ -0.48
Cxcl12P40224 Rps19-ps10-201ENSMUST00000159750 435 ntBASIC12.04□□□□□ -0.48
Cxcl12P40224 Gm9372-201ENSMUST00000168454 430 ntBASIC12.04□□□□□ -0.48
Cxcl12P40224 Gm23694-201ENSMUST00000179335 110 ntBASIC12.04□□□□□ -0.48
Cxcl12P40224 Gm26976-201ENSMUST00000182929 908 ntBASIC12.04□□□□□ -0.48
Cxcl12P40224 C630004L07Rik-201ENSMUST00000193236 1275 ntBASIC12.04□□□□□ -0.48
Cxcl12P40224 Gm6606-201ENSMUST00000193613 947 ntBASIC12.04□□□□□ -0.48
Cxcl12P40224 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Cxcl12P40224 AC137871.1-201ENSMUST00000228278 475 ntBASIC12.04□□□□□ -0.48
Cxcl12P40224 Hddc2-201ENSMUST00000000304 858 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cxcl12P40224 Tprg-201ENSMUST00000056087 1084 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cxcl12P40224 Rhox8-201ENSMUST00000071885 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cxcl12P40224 Ptges3l-201ENSMUST00000093933 748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cxcl12P40224 Lrp2bp-201ENSMUST00000066451 1525 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Cxcl12P40224 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cxcl12P40224 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cxcl12P40224 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cxcl12P40224 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cxcl12P40224 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Cxcl12P40224 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC12.04□□□□□ -0.48
Cxcl12P40224 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cxcl12P40224 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cxcl12P40224 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cxcl12P40224 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cxcl12P40224 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cxcl12P40224 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Cxcl12P40224 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC12.03□□□□□ -0.48
Cxcl12P40224 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC12.03□□□□□ -0.48
Cxcl12P40224 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cxcl12P40224 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cxcl12P40224 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC12.03□□□□□ -0.48
Cxcl12P40224 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cxcl12P40224 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cxcl12P40224 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cxcl12P40224 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms