Protein–RNA interactions for Protein: P32958

Rom1, Rod outer segment membrane protein 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rom1P32958 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC9.27□□□□□ -0.93
Rom1P32958 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Rom1P32958 Gm8793-201ENSMUST00000183069 1303 ntBASIC9.27□□□□□ -0.93
Rom1P32958 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC9.27□□□□□ -0.93
Rom1P32958 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC9.27□□□□□ -0.93
Rom1P32958 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Rom1P32958 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC9.27□□□□□ -0.93
Rom1P32958 Zdhhc21-201ENSMUST00000030110 8763 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Rom1P32958 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Rom1P32958 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Rom1P32958 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC9.26□□□□□ -0.93
Rom1P32958 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Rom1P32958 Usp2-203ENSMUST00000114830 2122 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Rom1P32958 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC9.26□□□□□ -0.93
Rom1P32958 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Rom1P32958 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Rom1P32958 Slc7a1-201ENSMUST00000048116 7179 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Rom1P32958 Rin1-208ENSMUST00000225427 4503 ntAPPRIS P2 BASIC9.26□□□□□ -0.93
Rom1P32958 Vwa5b2-202ENSMUST00000096197 4527 ntAPPRIS ALT2 TSL 5 BASIC9.26□□□□□ -0.93
Rom1P32958 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC9.26□□□□□ -0.93
Rom1P32958 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC9.26□□□□□ -0.93
Rom1P32958 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Rom1P32958 Kdm3a-202ENSMUST00000167220 4853 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Rom1P32958 Smg6-201ENSMUST00000045281 5848 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Rom1P32958 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Rom1P32958 Tnfaip8l3-201ENSMUST00000098760 4403 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Rom1P32958 Gm26660-202ENSMUST00000223620 4112 ntBASIC9.26□□□□□ -0.93
Rom1P32958 Adgrl3-217ENSMUST00000121707 6690 ntAPPRIS ALT2 TSL 5 BASIC9.26□□□□□ -0.93
Rom1P32958 Trim25-201ENSMUST00000000284 5566 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Rom1P32958 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Rom1P32958 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC9.26□□□□□ -0.93
Rom1P32958 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC9.26□□□□□ -0.93
Rom1P32958 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC9.26□□□□□ -0.93
Rom1P32958 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC9.26□□□□□ -0.93
Rom1P32958 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC9.26□□□□□ -0.93
Rom1P32958 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
Rom1P32958 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC9.26□□□□□ -0.93
Rom1P32958 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC9.26□□□□□ -0.93
Rom1P32958 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC9.26□□□□□ -0.93
Rom1P32958 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC9.26□□□□□ -0.93
Rom1P32958 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC9.26□□□□□ -0.93
Rom1P32958 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Rom1P32958 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC9.26□□□□□ -0.93
Rom1P32958 Gm10268-201ENSMUST00000085340 555 ntBASIC9.26□□□□□ -0.93
Rom1P32958 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC9.26□□□□□ -0.93
Rom1P32958 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC9.26□□□□□ -0.93
Rom1P32958 Gm5833-202ENSMUST00000190707 1932 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Rom1P32958 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Rom1P32958 Mapkbp1-201ENSMUST00000066058 6942 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Rom1P32958 Mgat5-201ENSMUST00000038361 8436 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Rom1P32958 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Rom1P32958 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Rom1P32958 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Rom1P32958 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Rom1P32958 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
Rom1P32958 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC9.26□□□□□ -0.93
Rom1P32958 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Rom1P32958 Tyw1-202ENSMUST00000044204 4698 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Rom1P32958 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
Rom1P32958 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Rom1P32958 Actl7a-201ENSMUST00000095079 1513 ntAPPRIS P1 BASIC9.26□□□□□ -0.93
Rom1P32958 Nxpe5-204ENSMUST00000161047 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Rom1P32958 Gm37613-201ENSMUST00000195677 3580 ntBASIC9.25□□□□□ -0.93
Rom1P32958 Invs-201ENSMUST00000030029 5633 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Rom1P32958 Amotl1-201ENSMUST00000013220 8957 ntAPPRIS P2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Rom1P32958 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Rom1P32958 Pik3cd-202ENSMUST00000105688 4335 ntAPPRIS ALT1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Rom1P32958 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Rom1P32958 AC124577.2-201ENSMUST00000217413 2420 ntBASIC9.25□□□□□ -0.93
Rom1P32958 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Rom1P32958 Cpne9-201ENSMUST00000041203 2777 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
Rom1P32958 Megf10-201ENSMUST00000075770 7514 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Rom1P32958 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Rom1P32958 Fam234b-201ENSMUST00000111915 4221 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Rom1P32958 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Rom1P32958 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC9.25□□□□□ -0.93
Rom1P32958 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC9.25□□□□□ -0.93
Rom1P32958 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC9.25□□□□□ -0.93
Rom1P32958 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Rom1P32958 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC9.25□□□□□ -0.93
Rom1P32958 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Rom1P32958 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Rom1P32958 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC9.25□□□□□ -0.93
Rom1P32958 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Rom1P32958 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Rom1P32958 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Rom1P32958 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Rom1P32958 Gm5419-201ENSMUST00000119301 527 ntBASIC9.25□□□□□ -0.93
Rom1P32958 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC9.25□□□□□ -0.93
Rom1P32958 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC9.25□□□□□ -0.93
Rom1P32958 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC9.25□□□□□ -0.93
Rom1P32958 Gm8738-201ENSMUST00000172606 329 ntBASIC9.25□□□□□ -0.93
Rom1P32958 Gm6244-201ENSMUST00000178732 841 ntBASIC9.25□□□□□ -0.93
Rom1P32958 Gm27486-201ENSMUST00000184923 80 ntBASIC9.25□□□□□ -0.93
Rom1P32958 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Rom1P32958 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC9.25□□□□□ -0.93
Rom1P32958 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Rom1P32958 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC9.25□□□□□ -0.93
Rom1P32958 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Rom1P32958 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC9.25□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms