Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vcam1P29533 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vcam1P29533 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vcam1P29533 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vcam1P29533 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vcam1P29533 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC13.44□□□□□ -0.26
Vcam1P29533 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vcam1P29533 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Vcam1P29533 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vcam1P29533 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC13.44□□□□□ -0.26
Vcam1P29533 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vcam1P29533 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vcam1P29533 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC13.43□□□□□ -0.26
Vcam1P29533 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Vcam1P29533 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Vcam1P29533 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Vcam1P29533 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC13.43□□□□□ -0.26
Vcam1P29533 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Vcam1P29533 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Vcam1P29533 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC13.43□□□□□ -0.26
Vcam1P29533 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Vcam1P29533 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Vcam1P29533 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Vcam1P29533 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Vcam1P29533 Yipf6-202ENSMUST00000113811 930 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Vcam1P29533 Gm16219-201ENSMUST00000120096 274 ntBASIC13.43□□□□□ -0.26
Vcam1P29533 Gm10169-201ENSMUST00000121822 348 ntBASIC13.43□□□□□ -0.26
Vcam1P29533 Gm15507-201ENSMUST00000133523 592 ntTSL 5 BASIC13.43□□□□□ -0.26
Vcam1P29533 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Vcam1P29533 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC13.43□□□□□ -0.26
Vcam1P29533 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Vcam1P29533 Gm25554-201ENSMUST00000158075 113 ntBASIC13.43□□□□□ -0.26
Vcam1P29533 Rabggtb-202ENSMUST00000167111 1418 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Vcam1P29533 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC13.43□□□□□ -0.26
Vcam1P29533 Gm43380-201ENSMUST00000200421 220 ntBASIC13.43□□□□□ -0.26
Vcam1P29533 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC13.43□□□□□ -0.26
Vcam1P29533 Gm45592-201ENSMUST00000209605 1043 ntBASIC13.43□□□□□ -0.26
Vcam1P29533 Gm45758-201ENSMUST00000212448 1006 ntBASIC13.43□□□□□ -0.26
Vcam1P29533 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC13.43□□□□□ -0.26
Vcam1P29533 Gm6722-201ENSMUST00000221586 390 ntBASIC13.43□□□□□ -0.26
Vcam1P29533 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Vcam1P29533 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Vcam1P29533 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Vcam1P29533 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Vcam1P29533 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
Vcam1P29533 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Vcam1P29533 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Vcam1P29533 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Vcam1P29533 Cog3-203ENSMUST00000227473 4197 ntBASIC13.43□□□□□ -0.26
Vcam1P29533 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Vcam1P29533 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Vcam1P29533 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Vcam1P29533 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vcam1P29533 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vcam1P29533 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vcam1P29533 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vcam1P29533 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vcam1P29533 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vcam1P29533 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Vcam1P29533 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Vcam1P29533 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vcam1P29533 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Vcam1P29533 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC13.42□□□□□ -0.26
Vcam1P29533 Gm12628-201ENSMUST00000122193 382 ntBASIC13.42□□□□□ -0.26
Vcam1P29533 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Vcam1P29533 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC13.42□□□□□ -0.26
Vcam1P29533 Gm23218-201ENSMUST00000158124 276 ntBASIC13.42□□□□□ -0.26
Vcam1P29533 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC13.42□□□□□ -0.26
Vcam1P29533 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC13.42□□□□□ -0.26
Vcam1P29533 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Vcam1P29533 Gm3726-201ENSMUST00000203110 785 ntBASIC13.42□□□□□ -0.26
Vcam1P29533 Cdipt-204ENSMUST00000206346 806 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Vcam1P29533 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC13.42□□□□□ -0.26
Vcam1P29533 Them5-201ENSMUST00000029794 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vcam1P29533 Krtap19-9b-201ENSMUST00000077715 461 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Vcam1P29533 Gm16380-201ENSMUST00000077997 478 ntBASIC13.42□□□□□ -0.26
Vcam1P29533 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vcam1P29533 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vcam1P29533 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Vcam1P29533 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vcam1P29533 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vcam1P29533 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC13.42□□□□□ -0.26
Vcam1P29533 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vcam1P29533 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vcam1P29533 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Vcam1P29533 AC157950.1-201ENSMUST00000217561 2168 ntBASIC13.42□□□□□ -0.26
Vcam1P29533 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vcam1P29533 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vcam1P29533 AC158636.1-201ENSMUST00000220118 1393 ntBASIC13.42□□□□□ -0.26
Vcam1P29533 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Vcam1P29533 Bmp4-202ENSMUST00000100676 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vcam1P29533 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Vcam1P29533 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vcam1P29533 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vcam1P29533 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Vcam1P29533 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC13.42□□□□□ -0.26
Vcam1P29533 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Vcam1P29533 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Vcam1P29533 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Vcam1P29533 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 65.6 ms