Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC12.09□□□□□ -0.47
Nfkb1P25799 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nfkb1P25799 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC12.09□□□□□ -0.47
Nfkb1P25799 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Nfkb1P25799 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nfkb1P25799 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC12.09□□□□□ -0.47
Nfkb1P25799 Gm15172-201ENSMUST00000118945 1046 ntBASIC12.09□□□□□ -0.47
Nfkb1P25799 Gm15725-201ENSMUST00000119947 1090 ntBASIC12.09□□□□□ -0.47
Nfkb1P25799 Gm14585-201ENSMUST00000120713 634 ntBASIC12.09□□□□□ -0.47
Nfkb1P25799 Gm13328-201ENSMUST00000120816 1020 ntBASIC12.09□□□□□ -0.47
Nfkb1P25799 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC12.09□□□□□ -0.47
Nfkb1P25799 Gm12208-201ENSMUST00000122004 163 ntBASIC12.09□□□□□ -0.47
Nfkb1P25799 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC12.09□□□□□ -0.47
Nfkb1P25799 Gm9136-201ENSMUST00000193368 454 ntBASIC12.09□□□□□ -0.47
Nfkb1P25799 Gm43186-201ENSMUST00000198130 824 ntBASIC12.09□□□□□ -0.47
Nfkb1P25799 Gm9463-201ENSMUST00000206707 601 ntBASIC12.09□□□□□ -0.47
Nfkb1P25799 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC12.09□□□□□ -0.47
Nfkb1P25799 AC129219.2-201ENSMUST00000224324 701 ntBASIC12.09□□□□□ -0.47
Nfkb1P25799 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nfkb1P25799 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nfkb1P25799 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nfkb1P25799 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nfkb1P25799 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nfkb1P25799 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nfkb1P25799 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Nfkb1P25799 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC12.09□□□□□ -0.47
Nfkb1P25799 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
Nfkb1P25799 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Nfkb1P25799 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nfkb1P25799 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Nfkb1P25799 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Nfkb1P25799 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Nfkb1P25799 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nfkb1P25799 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC12.09□□□□□ -0.47
Nfkb1P25799 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nfkb1P25799 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nfkb1P25799 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Nfkb1P25799 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC12.09□□□□□ -0.47
Nfkb1P25799 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Nfkb1P25799 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.47
Nfkb1P25799 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC12.08□□□□□ -0.47
Nfkb1P25799 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC12.08□□□□□ -0.47
Nfkb1P25799 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Nfkb1P25799 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Nfkb1P25799 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nfkb1P25799 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nfkb1P25799 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Nfkb1P25799 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Nfkb1P25799 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC12.08□□□□□ -0.48
Nfkb1P25799 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
Nfkb1P25799 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nfkb1P25799 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC12.08□□□□□ -0.48
Nfkb1P25799 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nfkb1P25799 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nfkb1P25799 Gm11949-201ENSMUST00000117640 372 ntBASIC12.08□□□□□ -0.48
Nfkb1P25799 Gm11783-201ENSMUST00000119549 885 ntBASIC12.08□□□□□ -0.48
Nfkb1P25799 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC12.08□□□□□ -0.48
Nfkb1P25799 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC12.08□□□□□ -0.48
Nfkb1P25799 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Nfkb1P25799 Gm28937-201ENSMUST00000185413 695 ntBASIC12.08□□□□□ -0.48
Nfkb1P25799 Gm29400-201ENSMUST00000187208 695 ntBASIC12.08□□□□□ -0.48
Nfkb1P25799 Gm28662-201ENSMUST00000188446 695 ntBASIC12.08□□□□□ -0.48
Nfkb1P25799 Gm28251-201ENSMUST00000188835 695 ntBASIC12.08□□□□□ -0.48
Nfkb1P25799 Gm37318-201ENSMUST00000194325 695 ntBASIC12.08□□□□□ -0.48
Nfkb1P25799 Gm38017-201ENSMUST00000194768 695 ntBASIC12.08□□□□□ -0.48
Nfkb1P25799 Gm38151-201ENSMUST00000195085 289 ntBASIC12.08□□□□□ -0.48
Nfkb1P25799 Gm37287-201ENSMUST00000195449 695 ntBASIC12.08□□□□□ -0.48
Nfkb1P25799 Gm37793-201ENSMUST00000195548 695 ntBASIC12.08□□□□□ -0.48
Nfkb1P25799 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Nfkb1P25799 Gm44270-201ENSMUST00000203084 1234 ntBASIC12.08□□□□□ -0.48
Nfkb1P25799 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Nfkb1P25799 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC12.08□□□□□ -0.48
Nfkb1P25799 AC153505.1-201ENSMUST00000218819 1071 ntBASIC12.08□□□□□ -0.48
Nfkb1P25799 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nfkb1P25799 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nfkb1P25799 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nfkb1P25799 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nfkb1P25799 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nfkb1P25799 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Nfkb1P25799 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nfkb1P25799 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nfkb1P25799 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nfkb1P25799 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nfkb1P25799 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nfkb1P25799 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nfkb1P25799 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nfkb1P25799 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nfkb1P25799 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nfkb1P25799 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nfkb1P25799 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nfkb1P25799 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC12.07□□□□□ -0.48
Nfkb1P25799 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nfkb1P25799 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nfkb1P25799 Gm11246-201ENSMUST00000120880 345 ntBASIC12.07□□□□□ -0.48
Nfkb1P25799 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC12.07□□□□□ -0.48
Nfkb1P25799 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC12.07□□□□□ -0.48
Nfkb1P25799 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Nfkb1P25799 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nfkb1P25799 Gm3150-201ENSMUST00000166418 204 ntBASIC12.07□□□□□ -0.48
Nfkb1P25799 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 67.6 ms