Protein–RNA interactions for Protein: P0C6B2

Ptcra, Pre T-cell antigen receptor alpha, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PtcraP0C6B2 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
PtcraP0C6B2 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
PtcraP0C6B2 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
PtcraP0C6B2 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC10.24□□□□□ -0.77
PtcraP0C6B2 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
PtcraP0C6B2 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
PtcraP0C6B2 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
PtcraP0C6B2 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC10.24□□□□□ -0.77
PtcraP0C6B2 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
PtcraP0C6B2 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
PtcraP0C6B2 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
PtcraP0C6B2 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
PtcraP0C6B2 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
PtcraP0C6B2 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
PtcraP0C6B2 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
PtcraP0C6B2 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
PtcraP0C6B2 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
PtcraP0C6B2 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
PtcraP0C6B2 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
PtcraP0C6B2 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
PtcraP0C6B2 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
PtcraP0C6B2 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
PtcraP0C6B2 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC10.24□□□□□ -0.77
PtcraP0C6B2 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC10.24□□□□□ -0.77
PtcraP0C6B2 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
PtcraP0C6B2 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
PtcraP0C6B2 Gm26952-201ENSMUST00000181996 409 ntTSL 3 BASIC10.24□□□□□ -0.77
PtcraP0C6B2 Gm38228-201ENSMUST00000193169 1293 ntBASIC10.24□□□□□ -0.77
PtcraP0C6B2 Gstp-ps-201ENSMUST00000195526 631 ntBASIC10.24□□□□□ -0.77
PtcraP0C6B2 Gm5982-201ENSMUST00000196234 512 ntBASIC10.24□□□□□ -0.77
PtcraP0C6B2 Gm5714-201ENSMUST00000197343 566 ntBASIC10.24□□□□□ -0.77
PtcraP0C6B2 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC10.24□□□□□ -0.77
PtcraP0C6B2 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
PtcraP0C6B2 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
PtcraP0C6B2 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
PtcraP0C6B2 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC10.24□□□□□ -0.77
PtcraP0C6B2 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC10.24□□□□□ -0.77
PtcraP0C6B2 Gm7841-201ENSMUST00000122108 1629 ntBASIC10.24□□□□□ -0.77
PtcraP0C6B2 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC10.24□□□□□ -0.77
PtcraP0C6B2 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
PtcraP0C6B2 Gm3836-201ENSMUST00000211377 1613 ntBASIC10.24□□□□□ -0.77
PtcraP0C6B2 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
PtcraP0C6B2 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
PtcraP0C6B2 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
PtcraP0C6B2 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
PtcraP0C6B2 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
PtcraP0C6B2 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
PtcraP0C6B2 Olfr239-202ENSMUST00000213731 3690 ntTSL 5 BASIC10.24□□□□□ -0.77
PtcraP0C6B2 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC10.24□□□□□ -0.77
PtcraP0C6B2 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC10.24□□□□□ -0.77
PtcraP0C6B2 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
PtcraP0C6B2 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
PtcraP0C6B2 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
PtcraP0C6B2 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
PtcraP0C6B2 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
PtcraP0C6B2 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC10.24□□□□□ -0.77
PtcraP0C6B2 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
PtcraP0C6B2 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
PtcraP0C6B2 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
PtcraP0C6B2 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
PtcraP0C6B2 Gm2238-201ENSMUST00000192074 3669 ntBASIC10.23□□□□□ -0.77
PtcraP0C6B2 Asb8-204ENSMUST00000143400 2226 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
PtcraP0C6B2 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
PtcraP0C6B2 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
PtcraP0C6B2 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
PtcraP0C6B2 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
PtcraP0C6B2 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
PtcraP0C6B2 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
PtcraP0C6B2 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC10.23□□□□□ -0.77
PtcraP0C6B2 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
PtcraP0C6B2 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
PtcraP0C6B2 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
PtcraP0C6B2 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
PtcraP0C6B2 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC10.23□□□□□ -0.77
PtcraP0C6B2 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC10.23□□□□□ -0.77
PtcraP0C6B2 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
PtcraP0C6B2 Defa-ps4-201ENSMUST00000118021 183 ntBASIC10.23□□□□□ -0.77
PtcraP0C6B2 Gm13899-201ENSMUST00000121519 1255 ntBASIC10.23□□□□□ -0.77
PtcraP0C6B2 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC10.23□□□□□ -0.77
PtcraP0C6B2 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
PtcraP0C6B2 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC10.23□□□□□ -0.77
PtcraP0C6B2 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
PtcraP0C6B2 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
PtcraP0C6B2 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
PtcraP0C6B2 Gm8100-201ENSMUST00000182906 988 ntBASIC10.23□□□□□ -0.77
PtcraP0C6B2 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
PtcraP0C6B2 Gm2260-201ENSMUST00000184965 657 ntBASIC10.23□□□□□ -0.77
PtcraP0C6B2 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
PtcraP0C6B2 Ighv1-48-201ENSMUST00000191795 294 ntBASIC10.23□□□□□ -0.77
PtcraP0C6B2 Gm4482-201ENSMUST00000200876 742 ntBASIC10.23□□□□□ -0.77
PtcraP0C6B2 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
PtcraP0C6B2 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC10.23□□□□□ -0.77
PtcraP0C6B2 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC10.23□□□□□ -0.77
PtcraP0C6B2 Gm9176-201ENSMUST00000219955 1120 ntBASIC10.23□□□□□ -0.77
PtcraP0C6B2 AC133602.1-201ENSMUST00000227510 509 ntBASIC10.23□□□□□ -0.77
PtcraP0C6B2 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
PtcraP0C6B2 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
PtcraP0C6B2 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
PtcraP0C6B2 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
PtcraP0C6B2 Gm13812-201ENSMUST00000118061 1347 ntBASIC10.23□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms